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Align VIMSS536369 to PF11896 (DUF3416)

VIMSS536369 has 712 amino acids

Query:       DUF3416  [M=179]
Accession:   PF11896.8
Description: Domain of unknown function (DUF3416)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.6e-62  196.0   0.2    5.4e-62  195.4   0.2    1.3  1  VIMSS536369  


Domain annotation for each sequence (and alignments):
>> VIMSS536369  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  195.4   0.2   5.4e-62   5.4e-62       1     179 []      21     237 ..      21     237 .. 0.90

  Alignments for each domain:
  == domain 1  score: 195.4 bits;  conditional E-value: 5.4e-62
      DUF3416   1 griaIedvsPevdgGrfpaKavvGetvpVeAdvfrdGhdalaAtlvlr.............................ragekewqevpMt..pggndr 67 
                  gr++I++v+P+v++G++paKavvGe+vpV+A+v+r+Gh+a+aAtlv+r                             ++++ +  ++pMt  p+ + +
  VIMSS536369  21 GRVEIDNVQPVVSCGTYPAKAVVGEVVPVSASVWREGHEAVAATLVVRylgpayppvtetrrvkavqapvadregrvDQQRIKPLSLPMTmgPE-PYV 117
                  69****************************************************999988888888777777666553334666699***9776.9** PP

      DUF3416  68 weasftpdelGryeftveAWvDpfatWrhdlekkveagqdvele...leeGarlleraaeraea.....aalraaaaalrdd..peerlaaalseeva 155
                  ++++ftpd++G ++f+v++W Dp+++Wrh+l +k++agq  ++    l+ Ga+l+eraa+   +     ++l aaaaalr++  p +r a+al++e++
  VIMSS536369 118 FHGQFTPDQVGLWTFRVDGWGDPIHSWRHGLVAKLDAGQGETELsndLLVGAELFERAATG--VprarrEPLLAAAAALRTAgdPVTRTALALAPEIE 213
                  **************************************876655555************55..34588899********66666************** PP

      DUF3416 156 allaryplrelatrseklpveVdR 179
                  ++la+yplr+l+tr+e++ v+VdR
  VIMSS536369 214 EILAEYPLRDLLTRGEQYGVWVDR 237
                  ***********************9 PP



Or compare VIMSS536369 to CDD or PaperBLAST