PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003896313.1 to PF11896 (GlgE_dom_N_S)

WP_003896313.1 has 692 amino acids

Query:       GlgE_dom_N_S  [M=179]
Accession:   PF11896.12
Description: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-59  187.3   0.0    3.8e-59  186.1   0.0    1.6  1  WP_003896313.1  


Domain annotation for each sequence (and alignments):
>> WP_003896313.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  186.1   0.0   3.8e-59   3.8e-59       1     179 []       3     217 ..       3     217 .. 0.91

  Alignments for each domain:
  == domain 1  score: 186.1 bits;  conditional E-value: 3.8e-59
    GlgE_dom_N_S   1 grivIedVsPevdgGrfpaKavvGeeveVeAdvfrdGhdavaatvvlr...........................aegekewrevpMt.pggnDr 67 
                     gri I+dV+P+v++Gr+paKavvGe v+V+A+v+r+Ghdav+at+v+r                           + ++ + + ++M+    +D 
  WP_003896313.1   3 GRIGIDDVAPVVSCGRYPAKAVVGEVVPVRATVWREGHDAVSATLVVRylgtefprlasgpgttppavplgtvvqPGKRVKPQILQMSkGRTPDV 97 
                     79**********************************************999999999998888888888888775223366778899986669** PP

    GlgE_dom_N_S  68 weaeftldeeGrwefrveAWsDpfatWrhdlekkveagqdvele...leeGaelleraaeraee.....ealraaaaalrde..peerlaaalsp 152
                     +++eft+d++G w+frv++W Dp+atWrh++e+k+eagq+ ++    l+ Ga+ll raae   +     + l +aa++lr+   p +r+  alsp
  WP_003896313.1  98 FHGEFTPDAVGLWTFRVDGWGDPIATWRHAVEAKLEAGQSETELnndLLVGARLLMRAAEG--VprklrDPLLEAAQQLRTPgdPYQRAGGALSP 190
                     **************************************987766677************55..34689888********87788*********** PP

    GlgE_dom_N_S 153 elaallarhplrelvtrseklpvlvdR 179
                     e+a+ll ++plre+vtr+e + v+vdR
  WP_003896313.1 191 EVADLLLQYPLREFVTRGEVHGVWVDR 217
                     **************************9 PP



Or compare WP_003896313.1 to CDD or PaperBLAST