biolip::4cn1A has 649 amino acids
Query: GlgE_dom_N_S [M=179]
Accession: PF11896.12
Description: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-68 214.8 1.6 1.1e-67 213.9 1.6 1.5 1 biolip::4cn1A
Domain annotation for each sequence (and alignments):
>> biolip::4cn1A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 213.9 1.6 1.1e-67 1.1e-67 1 179 [] 5 192 .. 5 192 .. 0.96
Alignments for each domain:
== domain 1 score: 213.9 bits; conditional E-value: 1.1e-67
GlgE_dom_N_S 1 grivIedVsPevdgGrfpaKavvGeeveVeAdvfrdGhdavaatvvlraegekewrevpMt...pggnDrweaeftldeeGrwefrveAWsDpfat 93
gri++ dV+P+v+ Gr paKav+Ge++eV+A+vfr+Ghdav+a+vvlr+ + + ++pM+ p g+Drw a++t e+G+w+++veAW Dp++t
biolip::4cn1A 5 GRIPVLDVRPVVQRGRRPAKAVTGESFEVSATVFREGHDAVGANVVLRDPRGRPGPWTPMRelaP-GTDRWGATVTAGETGTWSYTVEAWGDPVTT 99
79**********************************************7777*********9955.5***************************** PP
GlgE_dom_N_S 94 WrhdlekkveagqdveleleeGaelleraaeraee......ealraaaaalrde...peerlaaalspelaallarhplrelvtrseklpvlvdR 179
Wrh++++k++ag d++l leeGa+l+eraa a++ ++l aa++alrde +++rlaaal+p+++a+larhplr+lvt+s++lp+lv+R
biolip::4cn1A 100 WRHHARIKIPAGLDTDLVLEEGARLYERAA--ADVpgredrRELLAAVDALRDEsrpAASRLAAALTPQVDAVLARHPLRDLVTSSDPLPLLVER 192
******************************..54467999999********988898999**********************************9 PP
Or compare biolip::4cn1A to CDD or PaperBLAST