biolip::5cimB has 675 amino acids
Query: GlgE_dom_N_S [M=179]
Accession: PF11896.12
Description: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-61 193.4 0.1 3.4e-61 192.8 0.1 1.3 1 biolip::5cimB
Domain annotation for each sequence (and alignments):
>> biolip::5cimB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 192.8 0.1 3.4e-61 3.4e-61 1 179 [] 4 200 .. 4 200 .. 0.94
Alignments for each domain:
== domain 1 score: 192.8 bits; conditional E-value: 3.4e-61
GlgE_dom_N_S 1 grivIedVsPevdgGrfpaKavvGeeveVeAdvfrdGhdavaatvvlr...............aegekewrevpMt.pggnDrweaeftldeeGrw 80
grivI+dV+P+v++Gr+paKavvGe v+V A+v+r+Ghdavaat+v+r g+ + +++pM+ + +D ++++ft+d++G w
biolip::5cimB 4 GRIVIDDVQPVVSNGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRyhgttypdladpppgVPGAVKPQRLPMSpGHTPDVFHGHFTPDRVGLW 99
7***********************************************9999999988888884577999******75569*************** PP
GlgE_dom_N_S 81 efrveAWsDpfatWrhdlekkveagqdveleleeGaelleraaeraee.....ealraaaaalrde..peerlaaalspelaallarhplrelvtr 169
++rv++W Dp+a+Wrh++++k+ ++++l+ Ga+lleraa+ + eal +aaaalr+ p +r+ aals+e+++lla++plre+vtr
biolip::5cimB 100 TYRVDGWGDPIASWRHNVTAKLSE---LNNDLLVGARLLERAATG--VprelrEALLEAAAALRAPgdPFTRAGAALSAEVSDLLAEYPLREFVTR 190
**********************87...99**************44..35699999********87788**************************** PP
GlgE_dom_N_S 170 seklpvlvdR 179
+e++ v+vdR
biolip::5cimB 191 GEQYGVWVDR 200
*********9 PP
Or compare biolip::5cimB to CDD or PaperBLAST