A3X3R1 has 405 amino acids
Query: DUF3419 [M=385]
Accession: PF11899.12
Description: Protein of unknown function (DUF3419)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.2e-107 343.5 0.0 1.2e-106 343.1 0.0 1.0 1 A3X3R1
Domain annotation for each sequence (and alignments):
>> A3X3R1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 343.1 0.0 1.2e-106 1.2e-106 5 384 .. 27 402 .. 24 402 .. 0.96
Alignments for each domain:
== domain 1 score: 343.1 bits; conditional E-value: 1.2e-106
DUF3419 5 qFk...seliYaftWEDprvdleaLklepddtvlaItSaGdNiLsYllaspkrihaVDlNpaqnhLleLKlaaira.lsyedfwklfGegkhenfeellesk 102
qF+ +l+Y+++WEDp vd++aL++ p+d++++I+S+ +N LsYl+a p++++aVDl+pa+++L +LKlaa+r+ ++y+ f+++fG+++++++ l+e+
A3X3R1 27 QFSrlfLGLVYPQIWEDPVVDMAALEIAPSDHLVCIASGSCNLLSYLTAGPASVTAVDLSPAHVALGQLKLAAARSlPDYAAFYQFFGRADMPSNLPLYERY 128
666555789*******************************************************************99************************ PP
DUF3419 103 lsphLssearqyWdkraekvFss....kgkglydtGssgrairlarllfrllglrkdvkklleaktleeqreiwekkirplllsklvsklvlgnekfllkal 200
+ p+L +ar+yW+ r+ +F++ +kg+y+ G +gr++ +++l++ l ++ ++ ll+a++++eq+ ++++ki+pl+ + lv+kl ++l++l
A3X3R1 129 IMPNLGLDARDYWEGRQ--LFNRrisvFQKGFYHYGVLGRFLGAVHLVAGLGRV--SFAPLLAARSVQEQQVFFDQKIAPLFDMWLVRKLA--GFRAALFGL 224
****************9..55554444567**********************99..8*********************************9..77899**** PP
DUF3419 201 Gvpknqlalleee.gesvaeyvvdtldpvaeklllsedNyFyllaltgky...tkeclPdyLkeeafeklkkradraldelrlhtdsleevlarlkkksltr 298
G+p++q++ l+++ +++v+ ++++++++++++++++ +NyF+++a+++ y + +lP+yL++++f++l+++a+r r+ ++s+++ l++ +++s +
A3X3R1 225 GIPPAQYDKLAADgDGDVLPVLRERVRKLMCDFPIR-ENYFAWQAFARGYdpaPDGSLPPYLQQRNFQALRDNAER----GRIVNRSFTDQLEQEPDGSKQG 321
**********9998889*******************.*************8877889***************9988....9********************* PP
DUF3419 299 avllDhmDWlsdedleeeiqelnralkpggrvllrsaaekpwyikrfeklgFkveaiaareege.eeskeleaiDrvnmYasfwiat 384
++llD++DW++d++l++++q+++r+++pg++v++r+ +++ +++r+ + ai +r++++ e s++ +++Dr+++Y+ f++++
A3X3R1 322 YILLDAQDWMNDSQLNALWQQITRTATPGAKVIFRTGGTEDILPGRV------APAILDRWSYDlEVSEKGTKQDRSAIYGAFHLYR 402
***********************************************......9******************************985 PP
Or compare A3X3R1 to CDD or PaperBLAST