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Align Q66S17 to PF11901 (DM9)

Q66S17 has 364 amino acids

Query:       DM9  [M=115]
Accession:   PF11901.12
Description: DM9 repeat
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.2e-16   46.9   4.5    6.3e-14   38.2   0.8    3.3  3  Q66S17    


Domain annotation for each sequence (and alignments):
>> Q66S17  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    2.3   0.2    0.0083    0.0083      52      90 ..      48      87 ..      39      94 .. 0.78
   2 !   38.2   0.8   6.3e-14   6.3e-14       8     114 ..      79     174 ..      72     175 .. 0.83
   3 !   17.9   0.2   1.2e-07   1.2e-07      10      50 ..     148     184 ..     141     199 .. 0.79

  Alignments for each domain:
  == domain 1  score: 2.3 bits;  conditional E-value: 0.0083
     DM9 52 pseyeWvp.ssdgsvpkgAvegGttedgeplyigrakyeg 90
            +s+++W   + +g vp+gAv+  + e++ + y++ + +++
  Q66S17 48 QSNLQWNYwDGQGAVPDGAVSIWNGEEKRTDYVCSCGCSS 87
            6677786525689********9999999999999876665 PP

  == domain 2  score: 38.2 bits;  conditional E-value: 6.3e-14
     DM9   8 YvgRakhegdllpgkvvpekga.ayvsyggkehekseyevLv.akepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiGkvhpshkvlyipy 108
             Yv+++ +++     k      a ++++yg +e + s + +Lv + + +++eW   sdgsvpk+Ave+      e++y+g+ ky     +Gkvh++h+ l++p+
  Q66S17  79 YVCSCGCSSGFYSTKTG----AnCHYAYGETEKTCSGFSILVnRDNFENLEWKGGSDGSVPKNAVEV-----CEKVYVGKNKYG----LGKVHTKHEALFLPW 168
             55555555555444443....348******************8667899****************98.....6899***98875....9************** PP

     DM9 109 ggkevs 114
             +g+e++
  Q66S17 169 HGEEHW 174
             ****97 PP

  == domain 3  score: 17.9 bits;  conditional E-value: 1.2e-07
     DM9  10 gRakhegdllpgkvvpekgaayvsyggkehekseyevLvak 50 
             g+    ++   gkv ++++a ++++ g+eh  ++yevL+ +
  Q66S17 148 GK----NKYGLGKVHTKHEALFLPWHGEEHWYKDYEVLTVN 184
             44....344579**************************933 PP



Or compare Q66S17 to CDD or PaperBLAST