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Align SwissProt::Q66S21 to PF11901 (DM9)

SwissProt::Q66S21 has 376 amino acids

Query:       DM9  [M=115]
Accession:   PF11901.12
Description: DM9 repeat
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    4.9e-15   41.7   2.6    9.6e-13   34.4   0.8    2.9  3  SwissProt::Q66S21  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q66S21  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.8   0.1   0.00071   0.00071      49      72 ..      30      52 ..      16      68 .. 0.84
   2 !   34.4   0.8   9.6e-13   9.6e-13      19     114 ..      71     161 ..      53     162 .. 0.84
   3 !   10.0   0.1   3.4e-05   3.4e-05       7      50 ..     132     171 ..     128     189 .. 0.77

  Alignments for each domain:
  == domain 1  score: 5.8 bits;  conditional E-value: 0.00071
                DM9 49 akepseyeWvpssdgsvpkgAveg 72
                       ++++++++Wv++ +gsvp+gAv+ 
  SwissProt::Q66S21 30 TNDETNLHWVKC-GGSVPDGAVSI 52
                       57899******9.7********86 PP

  == domain 2  score: 34.4 bits;  conditional E-value: 9.6e-13
                DM9  19 lpgkvvpekgaayvsyggkeheks.eyevLv.akepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiGkvhpshkvlyipy 108
                          g + ++ ++++++yg+ke++ s +  +Lv + + + +eW   + gsvp++Av++ +t+   ++y+g++ y     +Gk+ p++++ly  +
  SwissProt::Q66S21  71 QAGYYSTKDSKCHYPYGTKEMATStNCYILVnRDNFELLEWKDGYAGSVPDNAVSTCKTN---KIYVGKGAY----GLGKIEPANHCLYYVW 155
                        45777888899**********9965999***75677899***************988776...9****9776....59************** PP

                DM9 109 ggkevs 114
                        +g e +
  SwissProt::Q66S21 156 DGAETW 161
                        **9975 PP

  == domain 3  score: 10.0 bits;  conditional E-value: 3.4e-05
                DM9   7 iYvgRakhegdllpgkvvpekgaayvsyggkehekseyevLvak 50 
                        iYvg+  +      gk+ p +++ y+ ++g e+  ++y+ L+ +
  SwissProt::Q66S21 132 IYVGKGAY----GLGKIEPANHCLYYVWDGAETWTKTYQALTMN 171
                        55555444....47999999999999999999999999999932 PP



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