SwissProt::Q66S25 has 355 amino acids
Query: DM9 [M=115] Accession: PF11901.12 Description: DM9 repeat Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.2e-16 44.7 2.7 7.7e-14 37.9 0.9 2.7 2 SwissProt::Q66S25 Domain annotation for each sequence (and alignments): >> SwissProt::Q66S25 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 6.8 0.2 0.00035 0.00035 49 75 .. 30 55 .. 14 78 .. 0.73 2 ! 37.9 0.9 7.7e-14 7.7e-14 14 114 .. 64 160 .. 51 161 .. 0.85 Alignments for each domain: == domain 1 score: 6.8 bits; conditional E-value: 0.00035 DM9 49 akepseyeWvpssdgsvpkgAvegGtt 75 ++++++++Wv++ +gsvp+gAv+ +t SwissProt::Q66S25 30 TNDETNLHWVKC-GGSVPDGAVSIQNT 55 57899******9.7********97655 PP == domain 2 score: 37.9 bits; conditional E-value: 7.7e-14 DM9 14 h..egdllpgkvvpekgaayvsyggkehekseyevLv.akepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiGkvhpshk 102 + ++++ g + ++ +++++++g e + s e+Lv + + + +eW + + gs+p++Av++ +t+ ++y+g++ y +Gk+ p+h+ SwissProt::Q66S25 64 YvcKSNCEAGYYSTKDSKCHYPFGRVEQTTSVCEILVnRDNFELLEWKEGYAGSLPANAVSTCKTN---RIYVGKGAY----GLGKIEPAHH 148 343666777888999999*******************75577889***************988776...9****9776....59******** PP DM9 103 vlyipyggkevs 114 +ly ++g e + SwissProt::Q66S25 149 CLYYGWNGAETW 160 ********9975 PP
Or compare SwissProt::Q66S25 to CDD or PaperBLAST