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Align XP_004932371.1 to PF11901 (DM9)

XP_004932371.1 has 458 amino acids

Query:       DM9  [M=115]
Accession:   PF11901.12
Description: DM9 repeat
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-62  193.2   4.4    1.3e-44  137.1   0.3    3.0  3  XP_004932371.1  


Domain annotation for each sequence (and alignments):
>> XP_004932371.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.5   0.0      0.27      0.27      30      55 ..     172     201 ..     168     212 .. 0.60
   2 !   65.7   0.5   1.8e-22   1.8e-22      56     113 ..     320     377 ..     315     378 .. 0.97
   3 !  137.1   0.3   1.3e-44   1.3e-44       3     113 ..     341     448 ..     339     450 .. 0.96

  Alignments for each domain:
  == domain 1  score: -2.5 bits;  conditional E-value: 0.27
             DM9  30 ayvsyggkeheks.eyevLv...akepsey 55 
                     ++vs  ++  e++  ye+ +   ++++s +
  XP_004932371.1 172 CHVSLTTHPAEVDpMYEIIIggwENTQSVI 201
                     666666666666557777775554445555 PP

  == domain 2  score: 65.7 bits;  conditional E-value: 1.8e-22
             DM9  56 eWvpssdgsvpkgAvegGttedgeplyigrakyegsltiGkvhpshkvlyipyggkev 113
                      Wv  s+g+vp+gAv+gG++ +geply++ra +eg +++Gk+ psh+++y+p+gg e+
  XP_004932371.1 320 IWVDVSGGQVPPGAVVGGQDCSGEPLYVARAVHEGATIPGKLVPSHGCAYVPWGGIEH 377
                     6******************************************************997 PP

  == domain 3  score: 137.1 bits;  conditional E-value: 1.3e-44
             DM9   3 dgspiYvgRakhegdllpgkvvpekgaayvsyggkehekseyevLvakepseyeWvpssdgsvpkgAvegGttedgeplyigrakyegsltiGkv 97 
                     +g+p+Yv+Ra+heg  +pgk+vp++g+ayv++gg eh k +y++Lv       +Wvp+s+ +vp+gA  gG+tedgeplyigr+++egslt Gkv
  XP_004932371.1 341 SGEPLYVARAVHEGATIPGKLVPSHGCAYVPWGGIEHGKPQYQILVG---GPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKV 432
                     799*******************************************4...5679***************************************** PP

             DM9  98 hpshkvlyipyggkev 113
                     ++sh+v+yi++gg+e+
  XP_004932371.1 433 QQSHGVCYISFGGQEL 448
                     ***************7 PP



Or compare XP_004932371.1 to CDD or PaperBLAST