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Align CharProtDB::CH_123731 to PF11935 (DUF3453)

CharProtDB::CH_123731 has 764 amino acids

Query:       DUF3453  [M=226]
Accession:   PF11935.8
Description: Domain of unknown function (DUF3453)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    6.1e-52  162.6   4.2    6.1e-52  162.6   4.2    2.3  2  CharProtDB::CH_123731  


Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_123731  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.2   0.1     0.027     0.027     181     206 ..      34      59 ..       3      83 .. 0.68
   2 !  162.6   4.2   6.1e-52   6.1e-52       1     212 [.      96     330 ..      96     345 .. 0.85

  Alignments for each domain:
  == domain 1  score: 0.2 bits;  conditional E-value: 0.027
                DUF3453 181 lkvlllnllknssehplqskiqqlle 206
                            l+++++ + k+++ ++ +s+iqql+ 
  CharProtDB::CH_123731  34 LRSMFNLITKEPETQQQTSEIQQLIV 59 
                            56666666665555666666666654 PP

  == domain 2  score: 162.6 bits;  conditional E-value: 6.1e-52
                DUF3453   1 dpavvkkvIqaaasiYplvlrliiknsedsetWekmtalKdeIlrlvdssd...............ndgvrlaaiKFiervilvqtrg 73 
                            d a+++kvI++++ iY+l++++++ n++++++W+k+t+lK+ ++++++ s+               n++++l ++KF++++i+v +++
  CharProtDB::CH_123731  96 DIATLRKVIDISCVIYRLLFQYVALNDNSNQIWSKITELKNVLVNKFQ-SNfplppsdntehdllrNIATKLDLLKFMMTIIDVSSKT 182
                            6789************************99****************95.33355556677788999********************** PP

                DUF3453  74 ..vad..rneskeqseislsqvpdnhpilsprkLeaEAkrlL.drlLkvlqeasiltsslviatlnslasiakqRpqfankilqalls 156
                              + d  +  ++++ ++sl++vp+nh++++++++e E++ ++ +++L+v+ + +i++++l++atln+++ i+k++pqf+++ l+++++
  CharProtDB::CH_123731 183 riIGDpiQ--NTNSMQFSLNDVPPNHSLIKYDQMEYESQVIFkSMVLRVF-NYDIIIAPLITATLNHCILIMKRKPQFVPLLLKTIEE 267
                            96666643..356789**************************77888888.668********************************** PP

                DUF3453 157 fnplkk...pnlpptlsklqvksvektlkvlllnllk....nsse.hplqskiqqlleklgall 212
                            +++++k   ++++ +++kl++k+v+++l++++ ++ k    + +e +   +++ + l+++g+  
  CharProtDB::CH_123731 268 YDTNNKlqsNYQSLEQFKLARKYVDRNLRNFISHCQKykliP-PEfNMPLGRMANTLTERGTNI 330
                            *************************************65531.222333345555555444444 PP



Or compare CharProtDB::CH_123731 to CDD or PaperBLAST