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Align NP_001319093.1 to PF11935 (DUF3453)

NP_001319093.1 has 1325 amino acids

Query:       DUF3453  [M=226]
Accession:   PF11935.8
Description: Domain of unknown function (DUF3453)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.6e-60  190.0   0.0    6.5e-60  188.7   0.0    1.7  1  NP_001319093.1  


Domain annotation for each sequence (and alignments):
>> NP_001319093.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.7   0.0   6.5e-60   6.5e-60       1     220 [.     100     321 ..     100     327 .. 0.91

  Alignments for each domain:
  == domain 1  score: 188.7 bits;  conditional E-value: 6.5e-60
         DUF3453   1 dpavvkkvIqaaasiYplvlrliik.......nseds.etWekmtalKdeIlrl.vdssdndgvrlaaiKFiervilvqtrgvad...rnes..k 81 
                     dp+v+kk+I+ ++++++ +l++++         +  + e+W++m+++Kd ++++ +++++ +gv++ a+KF+e++il++t++ +d      s  +
  NP_001319093.1 100 DPTVAKKSISVGTTFFCTILEEMAMqfhhrgkVDRWCgELWTWMVKFKDTVFATaLEPGC-VGVKVLALKFMETFILLFTPDASDpekA--SseG 191
                     799********************886655444224466**********************.*********************7776532..1469 PP

         DUF3453  82 eqseislsqvpdnhpilsprkLeaEAkrlLdrlLkvlqeasiltsslviatlnslasiakqRpqfankilqallsfnplkkpnlpptlsklqvks 176
                     +++++++s++  +hpil+p++L++EA+r++++l++++q+a++l+++l+i+++++la++a++Rp ++n++l++ll+f+p+ +     t++ ++++s
  NP_001319093.1 192 SRHMFNISWLAGGHPILNPATLMSEANRTFGILVDFIQSANRLPGALTISVISCLAVVARKRPVHYNTVLSVLLEFHPNLE-----TVKGCHAAS 281
                     99****************************************************************************555.....68******* PP

         DUF3453 177 vektlkvlllnllknssehplqskiqqlleklgallqeiaavi....a 220
                     v++++++++l++l+        ++++ ++e++++ll++++a++    a
  NP_001319093.1 282 VQYSIRTAFLGFLR--------CTFSPIIESRDKLLRAFRAMNaadvA 321
                     **************........*******************9954444 PP



Or compare NP_001319093.1 to CDD or PaperBLAST