NP_649580.1 has 1165 amino acids
Query: SYMPK_PTA1_N [M=229] Accession: PF11935.12 Description: Symplekin/PTA1 N-terminal Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.9e-61 193.7 0.1 1.9e-61 193.7 0.1 2.5 3 NP_649580.1 Domain annotation for each sequence (and alignments): >> NP_649580.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.9 0.1 0.11 0.11 108 137 .. 65 94 .. 60 113 .. 0.53 2 ! 193.7 0.1 1.9e-61 1.9e-61 2 223 .. 117 335 .. 116 343 .. 0.91 3 ? -3.3 0.2 0.31 0.31 121 156 .. 972 1007 .. 965 1030 .. 0.59 Alignments for each domain: == domain 1 score: -1.9 bits; conditional E-value: 0.11 SYMPK_PTA1_N 108 kglldllLkvlqeepiissslvtatlnsla 137 ++ l+ +L++ +++++ + v+a +++++ NP_649580.1 65 EEFLESVLSLAHDSNMEVRKQVVAFVEQVC 94 445555555555554444444444444443 PP == domain 2 score: 193.7 bits; conditional E-value: 1.9e-61 SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvakns....nds.elWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeisdprrpeendfslskvpr 93 ++v+krviqa+ siY+ l+++++ + ++W+ l+ +K++il+++d ++ndg++++aiKFle vv++q+ + d+ + + dfsl++vp+ NP_649580.1 117 AQVIKRVIQACGSIYKNGLQYLCSLMepgdS-AeQAWNILSLIKAQILDMID-NENDGIRTNAIKFLEGVVVLQSFA-DEDSL-KRDGDFSLADVPD 209 68*********************95555634.45******************.556*******************88.33323.34779*******9 PP SYMPK_PTA1_N 94 nhpllkkqkLeaEAkglldllLkvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvektlkillln 190 +++l +++kL++E++++ld+lL+ ++ +++iss++++a+ sl++iak+Rp ++ +++a++++n+ n+pptl+ +qv+sv+k+lk++l+ NP_649580.1 210 HCTLFRREKLQEEGNNILDILLQ-FHGTTHISSVNLIACTSSLCTIAKMRPIFMGAVVEAFKQLNA-------NLPPTLTDSQVSSVRKSLKMQLQT 298 99999******************.9****************************************9.......99********************** PP SYMPK_PTA1_N 191 llkrnassplasriqqaleklgrllreiaell....e 223 llk++ + ++as+i+ +l +lg++ +ei++l+ + NP_649580.1 299 LLKNRGAFEFASTIRGMLVDLGSSTNEIQKLIpkmdK 335 *****************************99976552 PP == domain 3 score: -3.3 bits; conditional E-value: 0.31 SYMPK_PTA1_N 121 epiissslvtatlnslaiiakkRpqlasrilsalls 156 + ++ +++a+l++l+ ++ ++ + ++ l NP_649580.1 972 RDLYTQEVLMAVLQQLVEVTPLPTLMMRTTIQSLTL 1007 555566677777777766655444444444444444 PP
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