SwissProt::Q10222 has 670 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-51 160.2 1.6 7.6e-51 159.0 0.8 1.9 2 SwissProt::Q10222
Domain annotation for each sequence (and alignments):
>> SwissProt::Q10222
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 159.0 0.8 7.6e-51 7.6e-51 2 210 .. 87 292 .. 86 309 .. 0.91
2 ? -1.8 0.0 0.11 0.11 169 209 .. 358 397 .. 350 412 .. 0.67
Alignments for each domain:
== domain 1 score: 159.0 bits; conditional E-value: 7.6e-51
SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvaknsndselWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeisdprrpeendfslskvpr 93
+v k vi ++++iYplv+ + ++++nds++W++lt+lK++i++ +d+++ + + +iKF++ v+l+q +g i dpr +++d+slskvp+
SwissProt::Q10222 87 EEVKKDVISCSCTIYPLVFLHCCTSPNDSSTWDTLTKLKNEIINDFDKGN-KPLLISCIKFISCVILTQVPG-IRDPRLVTKSDVSLSKVPT 176
5799*******************************************877.*********************.*****999*********** PP
SYMPK_PTA1_N 94 nhpllkkqkLeaEAkglldllLkvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvektlk 185
+hp+++ + L EA++l++++ ++l++ ++++ +t +ln l +++k+R++la++i+ ll+f+ + + + + +++skl+++++ek+lk
SwissProt::Q10222 177 HHPFINSNILRIEANDLIEKIFSILFS-DSLNVLYITSVLNILPVLVKRRKELAPKIIGSLLEFHLPNP-KDEIELSNESKLAIRCIEKNLK 266
*************************98.589999*******************************7544.566666679************* PP
SYMPK_PTA1_N 186 illlnllk.rnassplasriqqalek 210
+ ll+l k ass +i+ +l+
SwissProt::Q10222 267 LILLHLAKsTGASSSSVEKIHAYLSG 292
********755667788888888873 PP
== domain 2 score: -1.8 bits; conditional E-value: 0.11
SYMPK_PTA1_N 169 pptlsklqvksvektlkilllnllkrnassplasriqqale 209
p ++ + ve ++ i+l +llk ++ ++++i+ + e
SwissProt::Q10222 358 PLANFDVTSIPVEVATEIVLTSLLKI-DKNYFHQQINMLRE 397
55556666667888899999999995.33556666665544 PP
Or compare SwissProt::Q10222 to CDD or PaperBLAST