VIMSS10081146 has 264 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.8e-30 90.1 0.0 1.4e-29 89.5 0.0 1.2 1 VIMSS10081146
Domain annotation for each sequence (and alignments):
>> VIMSS10081146
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 89.5 0.0 1.4e-29 1.4e-29 1 134 [. 100 244 .. 100 248 .. 0.90
Alignments for each domain:
== domain 1 score: 89.5 bits; conditional E-value: 1.4e-29
SYMPK_PTA1_N 1 dpavvkrviqaaasiYplvlrlvakns........ndselWekltalKskilsl.ldeadndgvklaaiKFlervvlvqtkgeisdprrpe....e 83
dp+v+k++i + ++ ++ +l+++a + + elW+++ ++K+ +++ l+++ +gvk+ a+KF+e+++l++t++ sdp++++ +
VIMSS10081146 100 DPTVAKKSISVGTTFFCTILEEMAMQFhhrgkvdrWCGELWTWMVKFKDTVFATaLEPGC-VGVKVLALKFMETFILLFTPD-ASDPEKASsegsR 193
799********************773233455554667****************889999.*******************99.8888877789999 PP
SYMPK_PTA1_N 84 ndfslskvprnhpllkkqkLeaEAkglldllLkvlqeepiissslvtatln 134
f++s++ hp+l++++L++EA++++++l++++q+ + + +l++ ++
VIMSS10081146 194 HMFNISWLAGGHPILNPATLMSEANRTFGILVDFIQSANRLPGALTISVIS 244
9***************************************99999998875 PP
Or compare VIMSS10081146 to CDD or PaperBLAST