XP_018087329.1 has 1202 amino acids
Query: SYMPK_PTA1_N [M=229]
Accession: PF11935.12
Description: Symplekin/PTA1 N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-61 191.8 1.6 1.4e-60 190.9 0.1 2.3 3 XP_018087329.1
Domain annotation for each sequence (and alignments):
>> XP_018087329.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.3 0.0 0.31 0.31 44 70 .. 30 55 .. 26 78 .. 0.77
2 ! 190.9 0.1 1.4e-60 1.4e-60 2 228 .. 113 337 .. 112 340 .. 0.92
3 ? -3.0 0.0 0.25 0.25 88 109 .. 786 808 .. 784 821 .. 0.76
Alignments for each domain:
== domain 1 score: -3.3 bits; conditional E-value: 0.31
SYMPK_PTA1_N 44 lslldeadndgvklaaiKFlervvlvq 70
l++ a +k+ ++K ++++++
XP_018087329.1 30 LNMAALAT-NDTKITMLKQVQELIINK 55
55555555.679999999999999865 PP
== domain 2 score: 190.9 bits; conditional E-value: 1.4e-60
SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvakns...nds.elWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeisdprrpe..endfslsk 90
++vvk++i++++++Y+++l++va+++ +++ ++W+ +t++ ++il ll+ +dndg++++a+KF+e ++++ +++ ++d++ p+ + d+sl++
XP_018087329.1 113 VNVVKKSILTMTQLYKVALQWVARSRppsEQQeSCWDLVTEMAADILLLLE-SDNDGMRTHAVKFVESLIVTLSPR-TADSEVPKrqDGDISLEQ 205
79**********************888995556****************99.778*******************99.5554433344779***** PP
SYMPK_PTA1_N 91 vprnhpllkkqkLeaEAkglldllLkvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvektlk 185
+p++h++lk+++L +k+ ++ lLk ++++p+iss ++ta l+sla+ia++Rp+++ ++++a +++++ n+pptl+k+qv+sv+k+lk
XP_018087329.1 206 IPPDHQFLKYNTLRDLGKQAVKELLK-FMAHPAISSINLTAALGSLASIARQRPMFMAEVIQAYETLHA-------NLPPTLAKSQVSSVRKNLK 292
**************************.7799*************************************9.......99***************** PP
SYMPK_PTA1_N 186 illlnllkrnassplasriqqaleklgrllreiaell..eeekkr 228
++ll++l++++s ++++ i+++l +lg+++ ei++ l ++++r
XP_018087329.1 293 LQLLSVLRHPSSYEYQGPISTLLLDLGTSQGEITRHLppPRDSNR 337
*********************************988887444444 PP
== domain 3 score: -3.0 bits; conditional E-value: 0.25
SYMPK_PTA1_N 88 lskvprnhpll.kkqkLeaEAkg 109
l+ +p+nh+l+ + ++ +EA+
XP_018087329.1 786 LALLPQNHKLIhELASVYTEATA 808
67889999999888888888865 PP
Or compare XP_018087329.1 to CDD or PaperBLAST