XP_018087329.1 has 1202 amino acids
Query: SYMPK_PTA1_N [M=229] Accession: PF11935.12 Description: Symplekin/PTA1 N-terminal Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.1e-61 191.8 1.6 1.4e-60 190.9 0.1 2.3 3 XP_018087329.1 Domain annotation for each sequence (and alignments): >> XP_018087329.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.3 0.0 0.31 0.31 44 70 .. 30 55 .. 26 78 .. 0.77 2 ! 190.9 0.1 1.4e-60 1.4e-60 2 228 .. 113 337 .. 112 340 .. 0.92 3 ? -3.0 0.0 0.25 0.25 88 109 .. 786 808 .. 784 821 .. 0.76 Alignments for each domain: == domain 1 score: -3.3 bits; conditional E-value: 0.31 SYMPK_PTA1_N 44 lslldeadndgvklaaiKFlervvlvq 70 l++ a +k+ ++K ++++++ XP_018087329.1 30 LNMAALAT-NDTKITMLKQVQELIINK 55 55555555.679999999999999865 PP == domain 2 score: 190.9 bits; conditional E-value: 1.4e-60 SYMPK_PTA1_N 2 pavvkrviqaaasiYplvlrlvakns...nds.elWekltalKskilslldeadndgvklaaiKFlervvlvqtkgeisdprrpe..endfslsk 90 ++vvk++i++++++Y+++l++va+++ +++ ++W+ +t++ ++il ll+ +dndg++++a+KF+e ++++ +++ ++d++ p+ + d+sl++ XP_018087329.1 113 VNVVKKSILTMTQLYKVALQWVARSRppsEQQeSCWDLVTEMAADILLLLE-SDNDGMRTHAVKFVESLIVTLSPR-TADSEVPKrqDGDISLEQ 205 79**********************888995556****************99.778*******************99.5554433344779***** PP SYMPK_PTA1_N 91 vprnhpllkkqkLeaEAkglldllLkvlqeepiissslvtatlnslaiiakkRpqlasrilsallsfnplkkaqsnntpptlsklqvksvektlk 185 +p++h++lk+++L +k+ ++ lLk ++++p+iss ++ta l+sla+ia++Rp+++ ++++a +++++ n+pptl+k+qv+sv+k+lk XP_018087329.1 206 IPPDHQFLKYNTLRDLGKQAVKELLK-FMAHPAISSINLTAALGSLASIARQRPMFMAEVIQAYETLHA-------NLPPTLAKSQVSSVRKNLK 292 **************************.7799*************************************9.......99***************** PP SYMPK_PTA1_N 186 illlnllkrnassplasriqqaleklgrllreiaell..eeekkr 228 ++ll++l++++s ++++ i+++l +lg+++ ei++ l ++++r XP_018087329.1 293 LQLLSVLRHPSSYEYQGPISTLLLDLGTSQGEITRHLppPRDSNR 337 *********************************988887444444 PP == domain 3 score: -3.0 bits; conditional E-value: 0.25 SYMPK_PTA1_N 88 lskvprnhpll.kkqkLeaEAkg 109 l+ +p+nh+l+ + ++ +EA+ XP_018087329.1 786 LALLPQNHKLIhELASVYTEATA 808 67889999999888888888865 PP
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