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Align NP_001034586.1 to PF11938 (DUF3456)

NP_001034586.1 has 187 amino acids

Query:       DUF3456  [M=156]
Accession:   PF11938.8
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.8e-46  142.8   0.0    9.4e-46  142.4   0.0    1.2  1  NP_001034586.1  


Domain annotation for each sequence (and alignments):
>> NP_001034586.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.4   0.0   9.4e-46   9.4e-46       1     156 []      31     177 ..      31     177 .. 0.91

  Alignments for each domain:
  == domain 1  score: 142.4 bits;  conditional E-value: 9.4e-46
         DUF3456   1 kCeaCkalveeleealseedpkkevdvgsfrldskgkkkkkkipyakSElrltevleevCekmldYalhkekktskrvykkmse.........dl 86 
                     +C+aC a+++e+++++s++dpkk ++vg+frl+++g+  +kk+p+a+SE++lte+leevC++m+dYal+++++t+++ yk++++         d+
  NP_001034586.1  31 YCSACMAIADEINYSISQTDPKKMIHVGGFRLKPDGSLTDKKVPLARSETYLTELLEEVCKSMSDYALYENPDTKEKSYKRFAPrdndggnfpDF 125
                     6********************************************************************************98766655555555 PP

         DUF3456  87 kelkelkdkevkvdlgipselkdepaevkelkkaCeelveeyEdeleelfkeeeeedleekLCeerskeC 156
                     k++k+                 d p++ ++lk+aCe++vee Ed++++lf + +++++++ LC+e+s++C
  NP_001034586.1 126 KNFKF-----------------DGPESSSALKFACESIVEELEDDIISLFAS-DSDHVAKTLCSEVSDHC 177
                     55444.................334667************************.8**************** PP



Or compare NP_001034586.1 to CDD or PaperBLAST