NP_057543.2 has 189 amino acids
Query: DUF3456 [M=150] Accession: PF11938.12 Description: TLR4 regulator and MIR-interacting MSAP Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-10 28.4 0.0 1.2e-09 24.9 0.0 2.2 1 NP_057543.2 Domain annotation for each sequence (and alignments): >> NP_057543.2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.9 0.0 1.2e-09 1.2e-09 1 150 [] 49 178 .. 49 178 .. 0.77 Alignments for each domain: == domain 1 score: 24.9 bits; conditional E-value: 1.2e-09 DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmld.Ynlhkekktskrtlkrlasrkgvkvelgikye 97 +C+aC+a+a ++ ++l+k + k ++ ++g g+r + Sel +t++l+ C++ ++ Y +++ ++ ++ t l + g ++++ NP_057543.2 49 RCDACRAVAYQMWQNLAKAETKLHTSNSG------GRR-------ELSELVYTDVLDRSCSRNWQdYGVREVDQVKRLTGPGLSE--G----PEPSIS 127 6***************8888777776665......544.......57*************765554*******888875444433..3....344444 PP DUF3456 98 lwdedsaevnkslkkaCerlvEeyEdeieelykkeqee.edlekkLCserskeC 150 + ++l++ C + + e+ ++ ++y+ +q+ le LC +++C NP_057543.2 128 VMVTG-GPWPTRLSRTCLHYLGEFGED--QIYEAHQQGrGALEALLCGGPQGAC 178 44334.55679************9888..788888888899******8877777 PP
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