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Align NP_057543.2 to PF11938 (DUF3456)

NP_057543.2 has 189 amino acids

Query:       DUF3456  [M=156]
Accession:   PF11938.8
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.7e-12   33.2   0.0    1.1e-10   28.4   0.0    2.6  1  NP_057543.2  


Domain annotation for each sequence (and alignments):
>> NP_057543.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   28.4   0.0   1.1e-10   1.1e-10       1     156 []      49     178 ..      49     178 .. 0.80

  Alignments for each domain:
  == domain 1  score: 28.4 bits;  conditional E-value: 1.1e-10
      DUF3456   1 kCeaCkalveeleealseedpkkevdvgsfrldskgkkkkkkipyakSElrltevleevCekmld.Yalhkekktskrvykkmsedlkelkelkdkev 97 
                  +C+aC+a++ ++ ++l++ + k ++ +++                + SEl++t+vl+  C++ ++ Y++++ ++ ++ +  + se ++       +++
  NP_057543.2  49 RCDACRAVAYQMWQNLAKAETKLHTSNSG-------------GRRELSELVYTDVLDRSCSRNWQdYGVREVDQVKRLTGPGLSEGPE-------PSI 126
                  5*****************99977755444.............34578*************777666****999976666666543333.......333 PP

      DUF3456  98 kvdlgipselkdep.aevkelkkaCeelveey.EdeleelfkeeeeedleekLCeerskeC 156
                  +        +  ++  + ++l+ +C + + e+ Ed+++e+ ++     le  LC+  +++C
  NP_057543.2 127 S--------VMVTGgPWPTRLSRTCLHYLGEFgEDQIYEAHQQ-GRGALEALLCGGPQGAC 178
                  3........22335589***********************999.79********9888888 PP



Or compare NP_057543.2 to CDD or PaperBLAST