SwissProt::Q4G063 has 349 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-12 33.0 7.1 5.8e-08 19.4 0.0 3.1 3 SwissProt::Q4G063
Domain annotation for each sequence (and alignments):
>> SwissProt::Q4G063
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.4 0.0 5.8e-08 5.8e-08 1 62 [. 27 82 .. 27 85 .. 0.80
2 ! 17.1 0.6 3e-07 3e-07 111 150 .] 84 124 .. 81 124 .. 0.93
3 ? -2.0 0.3 0.23 0.23 112 133 .. 314 335 .. 287 345 .. 0.60
Alignments for each domain:
== domain 1 score: 19.4 bits; conditional E-value: 5.8e-08
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCek 62
+C+ C++l+d++++ ++++++k+ g+ + ++k ky+ Se+rl+e++e++C++
SwissProt::Q4G063 27 QCQRCRTLVDKFNQGMANTARKN-FGGGN-----TAWEEKTLSKYEFSEIRLLEIMEGLCDS 82
69**************7776654.43444.....333457899*****************97 PP
== domain 2 score: 17.1 bits; conditional E-value: 3e-07
DUF3456 111 kkaCerlvEeyEdeieelykkeqee.edlekkLCserskeC 150
++ C++l+E++E+++e++ ++ +++ +l ++ C ++ k+C
SwissProt::Q4G063 84 DFECNQLLEQQEEQLEAWWQSLKKDyPNLFEWFCVRTLKAC 124
579*******************************9988887 PP
== domain 3 score: -2.0 bits; conditional E-value: 0.23
DUF3456 112 kaCerlvEeyEdeieelykkeq 133
C + Ee+Ed+ ++ ++e
SwissProt::Q4G063 314 CVCPDGFEETEDACVQTAQSEV 335
4466666777777666666544 PP
Or compare SwissProt::Q4G063 to CDD or PaperBLAST