SwissProt::Q8BQ47 has 245 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-48 150.1 0.7 3.2e-48 150.1 0.7 1.4 2 SwissProt::Q8BQ47
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8BQ47
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 150.1 0.7 3.2e-48 3.2e-48 1 147 [. 43 199 .. 43 202 .. 0.95
2 ? -3.6 0.6 0.74 0.74 119 127 .. 225 233 .. 211 241 .. 0.65
Alignments for each domain:
== domain 1 score: 150.1 bits; conditional E-value: 3.2e-48
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskr.......tlkrlasr 85
kCe+Ck+l el+eals++++++ev + g+ ld +gkr k++++y+ Se+rl e+le++Ce++ldYn+h+e+k+s r t+++l+ +
SwissProt::Q8BQ47 43 KCEVCKLLSMELQEALSRTGRSREVLELGQVLD-TGKR-KRHVPYSLSETRLEEALENLCERILDYNVHAERKGSLRyakgqsqTMATLKGL 132
8*******************************9.7886.9*****************************************99999999999 PP
DUF3456 86 ..kgvkvelgikyelwdedsaevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCser.....s 147
kgvkv+lgi+ elwde+s+ev + lkk+Ce+++Ee+Ed++ ++y+++qe+ l+++LC+++ +
SwissProt::Q8BQ47 133 vqKGVKVDLGIPLELWDEPSVEV-TFLKKQCETMLEEFEDVVGDWYFHHQEQ-PLQHFLCERHvlpasE 199
99*********************.************************9999.*******998665544 PP
== domain 2 score: -3.6 bits; conditional E-value: 0.74
DUF3456 119 EeyEdeiee 127
Ee E+ei++
SwissProt::Q8BQ47 225 EEEEEEITK 233
445555544 PP
Or compare SwissProt::Q8BQ47 to CDD or PaperBLAST