SwissProt::Q9D8I1 has 188 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.1e-13 35.2 0.0 2.3e-11 30.5 0.0 2.2 1 SwissProt::Q9D8I1
Domain annotation for each sequence (and alignments):
>> SwissProt::Q9D8I1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.5 0.0 2.3e-11 2.3e-11 1 149 [. 48 176 .. 48 177 .. 0.76
Alignments for each domain:
== domain 1 score: 30.5 bits; conditional E-value: 2.3e-11
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmld.Ynlhkekktskrtlkrlasrkgvkve 91
+C+aC+a+a ++ ++l+k + k ++ + l+ + Se +t++l++ C++ ++ Y +h+ ++ ++ t l + g
SwissProt::Q9D8I1 48 RCDACRAVAFQMGQRLAKAEAKSHTPDAS-GLQ------------ELSESTYTDVLDQTCSQNWQsYGVHEVNQMKRLTGPGLSK--G---- 120
5***************8888877776665.444............579************666655*******998875444444..3.... PP
DUF3456 92 lgikyelwdedsaevnkslkkaCerlvEey.EdeieelykkeqeeedlekkLCserske 149
++++ + + ++l+k C + + e+ Ed+i e+y++ q+ +le LC + +
SwissProt::Q9D8I1 121 PEPRISVMISG-GPWPNRLSKTCFHYLGEFgEDQIYEAYRQGQA--NLEALLCGGTHGP 176
34444444444.445699*****99998876999*****99555..6******876655 PP
Or compare SwissProt::Q9D8I1 to CDD or PaperBLAST