PaperBLAST – Find papers about a protein or its homologs

 

Align WP_206089604.1 to PF11999 (Ice_binding)

WP_206089604.1 has 467 amino acids

Query:       Ice_binding  [M=208]
Accession:   PF11999.12
Description: Ice-binding-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.9e-37  112.7  11.6    9.9e-37  112.7  11.6    4.2  3  WP_206089604.1  


Domain annotation for each sequence (and alignments):
>> WP_206089604.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -1.3   2.1     0.076     0.076      19      58 ..      47      89 ..      43     125 .. 0.55
   2 ?   -2.3   5.7      0.16      0.16     154     203 ..     177     228 ..     170     232 .. 0.82
   3 !  112.7  11.6   9.9e-37   9.9e-37      62     207 ..     325     465 ..     282     466 .. 0.81

  Alignments for each domain:
  == domain 1  score: -1.3 bits;  conditional E-value: 0.076
     Ice_binding 19 iGvspaaataitGfal.l...asg.estsglvltGkvyaadaaaa 58
                    + v+p +at +tG ++     as+   ts +v++ +v a+  a++
  WP_206089604.1 47 VTVTPPTATVLTGASQqFvatASYaDGTSRNVTDVSVWAS--ASP 89
                    6678888899999986534322244455555532222222..222 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.16
     Ice_binding 154 nvfWqVggsa..tlgtgstfeGnilaqtsitlntgatvnGrllaqtgaVtLd 203
                      v W  g++a  t+ + ++ +G+ + +t it+++g +    +l  t aV  d
  WP_206089604.1 177 KVNWTSGSTAiaTVAASGSATGVAVGNTVITASSGDKSATGALTVTPAVIVD 228
                     67788888776689999999*************9998888888888788665 PP

  == domain 3  score: 112.7 bits;  conditional E-value: 9.9e-37
     Ice_binding  62 tltqAvadletAyndaagrttpaltelgagelggltltpGvYkstssvtistgdltLDaqgdanavwiFqiastLttasgssvvLinGAqaknvf 156
                     +l    +dl++A ++a+ r++  l + g  +lggl+l+pGvY +++++++ tg+ltL  +g  n+++iF++ s+L+ta++ss+vL+nGA+  n f
  WP_206089604.1 325 ELSGPYEDLQVAVTNANNRPCAILSDAG-IDLGGLVLQPGVYCYSGAISL-TGKLTL--SG--NGTYIFRTMSSLNTAANSSIVLTNGASLDNLF 413
                     4455679************988866655.9********************.99****..33..478***************************** PP

     Ice_binding 157 WqVggsatlgtgstfeGnilaq.tsitlntgatv.nGrllaqtgaVtLdnnti 207
                     W+  g++tlg++s+f+G++l++ + it+ +gatv nGrll+ + aVtL nn+i
  WP_206089604.1 414 WVPVGATTLGANSAFQGTVLSRsEDITVGDGATVlNGRLLSGK-AVTLRNNKI 465
                     ********************97257*******999******99.*******98 PP



Or compare WP_206089604.1 to CDD or PaperBLAST