CharProtDB::CH_088627 has 901 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.3e-10 24.0 1.0 9.3e-10 24.0 1.0 3.4 3 CharProtDB::CH_088627
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_088627
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.0 1.0 9.3e-10 9.3e-10 18 191 .. 44 212 .. 25 221 .. 0.76
2 ? -0.8 1.7 0.032 0.032 100 170 .. 340 407 .. 290 433 .. 0.59
3 ! 2.3 1.0 0.0036 0.0036 285 353 .. 776 847 .. 624 873 .. 0.71
Alignments for each domain:
== domain 1 score: 24.0 bits; conditional E-value: 9.3e-10
DUF3533 18 GalykrsdrlknlnvlvVneDeg...gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenat 102
al++ ++++l+++v +D+ ++++++ +g++ +l+++k+++ wk+++ +++e+ + v ky++ ++ +++++
CharProtDB::CH_088627 44 KALWDPYANTSQLPIAVYSADKPasfQDKTIN-IGDE---VLKNLKKNHQLGWKFVD------SKAELDKGVKSGKYYAGIYLPKDFS 121
47778888999************663333333.3333...334444444467****8......9************************ PP
DUF3533 103 ealyaalasangass..ynstdllelvy..esgrdptnvksyilpilqaleaaalakyssellqslikslsnssqaallanllaspla 186
++l + ++ + ++++ y+ ++ ++ + +++ +++++s+i++ + ++++ l k +++ ++ k++ ++++++++ +l+++ +
CharProtDB::CH_088627 122 KDLLSFTTGDIKKPQivYSINEKINAIApkITSKGASSLQSQISEEFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSA--ILSTNDN 207
*******8887776522555577777753379999********999888888888889999999********9999997..8888777 PP
DUF3533 187 fnsiD 191
+ +iD
CharProtDB::CH_088627 208 LGTID 212
77666 PP
== domain 2 score: -0.8 bits; conditional E-value: 0.032
DUF3533 100 natealyaalasangassynstdllelvyesgrdptnvksyilpilqaleaaala.kyssellqslikslsn 170
+a +++++al + ++s + t l+++ e +++ ++v +i +++ + + + ++ ++ ++l++++i+++
CharProtDB::CH_088627 340 DAAKKMQSAL--PSITNSVQIT--LQSIQEFSKNTSSVLAVIDQAIADNQLTDEEkEQINSLITNFINNIAR 407
4555555555..2222222222..444444444444444444444433332222212223333333333333 PP
== domain 3 score: 2.3 bits; conditional E-value: 0.0036
DUF3533 285 twlvmlavglanenvasilvav.gppylpfwllfwvilNvsp..tfvPlelspgFYryGyal.Plhniveilk 353
++l++l++ +a +++ +lva g +++++++ +l +s + +P+++s +F++ P+ +v++l+
CharProtDB::CH_088627 776 SVLFALLISIAFMIMVYVLVALfGNVGKGIAIIIL-VLSISGggGNYPIQVSGKFFQAINPYlPFTHAVNLLR 847
34555555555555555555440455555555554.55666656899********998766558888888877 PP
Or compare CharProtDB::CH_088627 to CDD or PaperBLAST