CharProtDB::CH_123802 has 609 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.4e-112 360.2 25.8 8.7e-112 359.8 25.8 1.2 1 CharProtDB::CH_123802
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_123802
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 359.8 25.8 8.7e-112 8.7e-112 1 379 [. 181 570 .. 181 571 .. 0.98
Alignments for each domain:
== domain 1 score: 359.8 bits; conditional E-value: 8.7e-112
DUF3533 1 nllllavlilailsiywGalykrsdrlknlnvlvVneDeggselepvvgeavrdalnetkss.slgtwkvinssefke........ie 79
n++ l++ + a+l+iy G++y+r++r+knl++++ + D ++++l ++vg++++ +++++++ lg++++++ ++ ++ +
CharProtDB::CH_123802 181 NYVYLVLGFAAVLCIYTGSYYNRTSRFKNLKMAIMIGDRNSTQLPNIVGQTIEGYFTKVPALqALGNFDIWDYDRLSNlaashnntLT 268
7899********************************************************9999*********99999*******99* PP
DUF3533 80 eeieelvhkekyWgalvvkenatealyaalasangassynst.dllelvyesgrdptnvksyilpilqaleaaalakyssellq.sli 165
ee+++++h++kyW+a++v enat ++y+al a+g++++n+t +l+e+vye+grd+++v++yi +i+ ++ + + + + ++ l +++
CharProtDB::CH_123802 269 EEVYRQIHHQKYWAAFYVYENATLNWYQAL--ASGSKTFNPTnSLMEVVYETGRDYNAVNNYIVTIIGQILRGYYKFIPQSGLVvNML 354
******************************..9999******999****************************999887777777*** PP
DUF3533 166 kslsnssqaallan...llasplafnsiDlrPftdavllaplqvgliyliiltffqlallgklhaqmasrklkfkqllvyRllisvis 250
k+l++++++++++n l+++ +f++ Dl+P+ ++v a +q+ +yli+ltff +++ +++++++ ++k+k +++++R+++++++
CharProtDB::CH_123802 355 KTLNSTQANNVINNapqLISTIPTFSIHDLHPVPNPVFSATMQLAGVYLIVLTFFAFVFSIQIQMYI-ASKVKGIKYVIFRMMSNQVA 441
************99***99************************************************.******************** PP
DUF3533 251 lfvlSLffslvslafqvdftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYr 338
+f++SL f+++++af+ +f+ +fG+agF+v+W++++l+m+a+g ++e +++i++a +pp+++f+llf+v+lN++pt++P+ l+p+FYr
CharProtDB::CH_123802 442 YFIISLAFVVLNTAFGLPFNGTFGHAGFLVIWVFSYLLMSAIGSVIEFFVLIVFALKPPMIGFVLLFTVVLNLAPTISPIILCPKFYR 529
**************************************************************************************** PP
DUF3533 339 yGyalPlhniveilkvIffdtskgqlgrnlGiLfaWvvvnt 379
yGya+Pl n +++l+v +f+++kg++grn+GiLfaW+vv++
CharProtDB::CH_123802 530 YGYAMPLKNFYDLLQVAYFNAWKGHMGRNIGILFAWMVVSN 570
**************************************986 PP
Or compare CharProtDB::CH_123802 to CDD or PaperBLAST