Align VIMSS104788 to PF12051 (DUF3533)

VIMSS104788 has 993 amino acids

Query:       DUF3533  [M=380]
Accession:   PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.4e-09   22.6   0.6    2.4e-09   22.6   0.6    3.5  3  VIMSS104788  


Domain annotation for each sequence (and alignments):
>> VIMSS104788  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.6   0.6   2.4e-09   2.4e-09      20     163 ..      43     179 ..      24     213 .. 0.71
   2 ?   -3.3   0.4      0.18      0.18     163     178 ..     608     623 ..     557     692 .. 0.57
   3 ?   -0.2   3.7     0.021     0.021     283     339 ..     867     924 ..     732     957 .. 0.56

  Alignments for each domain:
  == domain 1  score: 22.6 bits;  conditional E-value: 2.4e-09
      DUF3533  20 lykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenatealyaalasa..n 113
                  +++   ++  ++v+vVneD+g  +++ +  vg+++ + l+++k     +w+++       ++e+  +++   ky++ ++++  +t +++  l ++  +
  VIMSS104788  43 MWDPYGNTGHIKVAVVNEDKGdtIRGKKVNVGNTMVNTLKKNK---SFDWQFV-------SREKADHEIKMGKYFAGIYIPSKFTHEITGTLRKQpqK 130
                  66666777889**********8877777777877777777776...4899999.......699999************************99654114 PP

      DUF3533 114 gassynstdllelvyesgrdptnvksyilpilqaleaaalakyssellqs 163
                   +++++ ++ ++ v  +  d t  + +++++ +++++++++++ +e  + 
  VIMSS104788 131 ADVEFKVNQKINAVASKLTD-TGSSVVVEKANEQFNKTVTRALLEEANKA 179
                  55667777777777766666.55566666666666666666555554442 PP

  == domain 2  score: -3.3 bits;  conditional E-value: 0.18
      DUF3533 163 slikslsnssqaalla 178
                  +++++l++++q+ ++ 
  VIMSS104788 608 NVQSKLNTIDQVINSG 623
                  3333333333333322 PP

  == domain 3  score: -0.2 bits;  conditional E-value: 0.021
      DUF3533 283 mitwlvmlavglanenvasilvavgppylpfwllfwvi.lNvsptfvPlelspgFYry 339
                  ++  ++++ ++++n +v + +   g p  +++++++v  ++   +++P++  p+F++ 
  VIMSS104788 867 LFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLqIAGGGGTFPIQTTPQFFQN 924
                  3455666667777777777776667777777666555324445589999999999985 PP

Or compare VIMSS104788 to CDD or PaperBLAST