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Align VIMSS331607 to PF12051 (DUF3533)

VIMSS331607 has 1106 amino acids

Query:       DUF3533  [M=380]
Accession:   PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.4e-12   30.9   1.8    7.4e-12   30.9   1.8    3.4  3  VIMSS331607  


Domain annotation for each sequence (and alignments):
>> VIMSS331607  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.9   1.8   7.4e-12   7.4e-12       5     168 ..      23     172 ..      19     190 .. 0.72
   2 ?   -5.4   4.9      0.77      0.77     108     158 ..     549     600 ..     492     636 .. 0.69
   3 ?    0.5   6.9     0.013     0.013     281     361 ..     979    1058 ..     841    1076 .. 0.67

  Alignments for each domain:
  == domain 1  score: 30.9 bits;  conditional E-value: 7.4e-12
      DUF3533   5 lavlilailsiyw.GalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvke 99 
                  +++li  + si++  ++++   +++nl+v+vVneD+   +++ + +vg++v + l++++     +w+++       + ++ ++ + + ky+ +++++ 
  VIMSS331607  23 VMILIPFLYSIFFlKSVWDPYGDTQNLPVAVVNEDKSvnYQGEKFAVGKQVVTNLKKNN---DLDWHFV-------SAKKAKQGLKDRKYYTVVTIPS 110
                  455555555555427999999****************9977777777777766666655...489*999.......6999****************** PP

      DUF3533 100 natealyaalasangassynstdllelvyesgrdptnvksyilpi.lqaleaaalakyssellqsliksl 168
                  n++++ ++ + ++ +         ++l ye++ + + ++++i+++ ++ +++ ++a++++ +   + k++
  VIMSS331607 111 NFSKNATTMTDTNPK--------KMNLHYETNESLNYIAKVITDTgVSRVNKSIRAQVTKAYALAIFKQI 172
                  *****9999943333........35666666666666666665432566666666666666555555554 PP

  == domain 2  score: -5.4 bits;  conditional E-value: 0.77
      DUF3533 108 alasangassynst.dllelvyesgrdptnvksyilpilqaleaaalakyss 158
                  ++a+++ a+  n++ ++++ +  +  ++t+v+ ++++++++l++ ++ ++ s
  VIMSS331607 549 STAKQQAATDLNAKmKQVQTTLGTVSKATTVDASLAQSFEKLQSGVNTYIDS 600
                  4444444444555556677777777777777777777777777777664333 PP

  == domain 3  score: 0.5 bits;  conditional E-value: 0.013
      DUF3533  281 yWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.PlhniveilkvIffdtsk 361 
                   y ++  +++la+ +++  + +++   + +++++++l+   l  s +++P+e+ ++F+   +   Pl +++++ ++ +++++ 
  VIMSS331607  979 YYLTAIMIALASMFLVMFLSMLF-DNPGRFVAMVILM-LQLGGSGGTFPMEITNKFFNAIHPYlPLTYSIQAFRQALTGGWG 1058
                   55555555555555555445555.6667777777665.56888999************999877***********9999886 PP



Or compare VIMSS331607 to CDD or PaperBLAST