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Align VIMSS3708144 to PF12051 (DUF3533)

VIMSS3708144 has 995 amino acids

Query:       DUF3533  [M=378]
Accession:   PF12051.8
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    6.2e-12   31.1  12.8    7.2e-11   27.6   0.5    3.3  3  VIMSS3708144  


Domain annotation for each sequence (and alignments):
>> VIMSS3708144  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   27.6   0.5   7.2e-11   7.2e-11      19     160 ..      44     179 ..      27     214 .. 0.67
   2 ?   -2.6   0.6      0.11      0.11     149     180 ..     599     628 ..     558     701 .. 0.63
   3 !   11.0   0.6   8.1e-06   8.1e-06     163     351 ..     759     941 ..     730     963 .. 0.74

  Alignments for each domain:
  == domain 1  score: 27.6 bits;  conditional E-value: 7.2e-11
       DUF3533  19 alyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvkenateklyaal.sa. 111
                   a+ ++  ++ +++v+vVneD+g   ++ + +vg+++ + +++++     +w++v       s+e+  +++  +ky++ i++++ +t +++  l ++ 
  VIMSS3708144  44 AMWDPYGNTGHIKVAVVNEDKGdtIRGKKVNVGNTMVNTLKKNK---SFDWQFV-------SREKADHEIKMGKYFAGIYIPSKFTHEITGTLrKQp 130
                   56777788899***********9988888888888888888777...4899999.......699**************************9994330 PP

       DUF3533 112 .ngassynstelleliyesgRdattvssyilpaltqleaaalakygsqll 160
                    + ++++++++ ++ +  +  d t  s ++ +a +q+++++++++ ++  
  VIMSS3708144 131 qKADVEFKVNQKINAVASKLTD-TGSSVVVEKANEQFNKTVTRALLEEAN 179
                   0223334444444444444443.333333333333333333333333322 PP

  == domain 2  score: -2.6 bits;  conditional E-value: 0.11
       DUF3533 149 aaalakygsqllqqliqslsntaqaaqlsnal 180
                   +++++  g++ l+++ ++l++++q+ ++ +a+
  VIMSS3708144 599 DELNK--GQTALSNVQSKLNTIDQVINSGQAI 628
                   44443..4444444444444444444433332 PP

  == domain 3  score: 11.0 bits;  conditional E-value: 8.1e-06
       DUF3533 163 liqslsntaqaaqlsna.llaspiafnsidlrPftdgvalaplqvgliyliiltffqfaflgklhaemg.lsrklkfkqllvyrllisvvslfvlSl 257
                   li +l    ++++ ++a ++a+pi+ +++d+ P++d  + +++ ++ ++ + +    ++ l  + ++   l + l  +q+++ +    +++ +  +l
  VIMSS3708144 759 LIDTL----KNDLKKQAgIIANPINKKTVDVFPVKDY-GSGMTPFYTALSVWVGALLMVSLLTVDNKHKsLESVLTTRQVFLGKAGFFIMLGMLQAL 850
                   33333....334434446****************996.4556679***9999999999999999988887788899999999888888888888888 PP

       DUF3533 258 ffslvs.lafqvdftvafGragFvvyWmitwlvmaavglanenvasilgppylpvwllfwvilNvss..tfvPlelspgFYrygyal.Plhniveil 350
                   ++s+   l+++  +       ++v++ +it ++ + +  +  + +s+lg+p+ +++++++v   ++   +++P++  p+F++      P+ ++++ l
  VIMSS3708144 851 IVSVGDlLILKAGV------ESPVLFVLITIFCSIIFNSIVYTCVSLLGNPGKAIAIVLLVL-QIAGggGTFPIQTTPQFFQNISPYlPFTYAIDSL 940
                   88877767777777......788988888888877777777777888899999988776654.444445************9766555777666666 PP

       DUF3533 351 r 351
                   r
  VIMSS3708144 941 R 941
                   5 PP



Or compare VIMSS3708144 to CDD or PaperBLAST