VIMSS37549 has 775 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.2e-14 38.3 21.2 9.6e-12 30.5 0.0 2.8 3 VIMSS37549
Domain annotation for each sequence (and alignments):
>> VIMSS37549
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.5 0.0 9.6e-12 9.6e-12 15 173 .. 34 178 .. 17 199 .. 0.74
2 ? -2.3 0.3 0.09 0.09 95 151 .. 423 478 .. 320 496 .. 0.59
3 ! 12.4 13.3 3.1e-06 3.1e-06 238 379 .. 617 752 .. 586 753 .. 0.71
Alignments for each domain:
== domain 1 score: 30.5 bits; conditional E-value: 9.6e-12
DUF3533 15 iywGalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenatealyaalas 111
++ a+++ + +l+v+vVn+D+g +++ + +g+ + + l++++ +w++ n + ++ +++ ++ky++++ ++e+++++ ++ l +
VIMSS37549 34 VFLKAYWDPYGTVDQLPVVVVNQDKGatYEGEKLQIGDDLVKELKDNN---NFDWHFSN------DLDQSLKDLLNQKYYLVVEIPEDFSKNASTVL-D 122
4556778888999*************9955555555555444444444...38899887......77778888999*********************.3 PP
DUF3533 112 angassynstdllelvyesgrdptnvksyi.lpilqaleaaalakyssellqslikslsnssq 173
+n + l+l y ++ + v i ++++++l+a + +++++++++ + +++++++
VIMSS37549 123 KNPK-------KLDLKYHTNAGSNYVGATIgEKAIDKLKASVSKEVTEQYTKVIFDNFKDIAK 178
3332.......356666666666666666637889999999999*******999999998876 PP
== domain 2 score: -2.3 bits; conditional E-value: 0.09
DUF3533 95 lvvkenatealyaalasangassynstdllelvyesgrdptnvksyilpilqaleaa 151
+ ++at++ly+ ++ +++ + t+ ++ +y+ +++ t ++ ++ + + +++
VIMSS37549 423 VKAMPEATSKLYNGA-KTIQDAIDRLTEGADKIYNGSQKLTDGQTKLTAGIGEYNKQ 478
344566666666666.44444445555666666666666666666555555555555 PP
== domain 3 score: 12.4 bits; conditional E-value: 3.1e-06
DUF3533 238 qllvyRllisvislfvlSLffslvslafqvdftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgF 336
++++ ++ + +++ ++ SL++ +v +++++ +v+ F v+ +it l++la++ + +a+ + + +++++++l+ l s +++Plel p+F
VIMSS37549 617 EWFFSKFNVMMLVGIIQSLIVATVL-LLGIGLEVESTW-RFYVFTIITSLAFLAIIQF---LATTM-GNPGRFIAVIILV-LQLGASGGTFPLELLPNF 708
5666666666666667777666664.344444444333.4666666666555554443...33333.2345566655544.45777889********** PP
DUF3533 337 YryGyal.PlhniveilkvIffdtskgqlgrnlGiLfaWvvvnt 379
Y++ + P+ +++++ + +++++ g + +G+L++ +v++
VIMSS37549 709 YQVIHGAlPMTYSINGFRAVISNGDFGYMWQMAGVLIGIALVMI 752
***99655*****************************9887765 PP
Or compare VIMSS37549 to CDD or PaperBLAST