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Align VIMSS3788406 to PF12051 (DUF3533)

VIMSS3788406 has 807 amino acids

Query:       DUF3533  [M=380]
Accession:   PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.3e-13   34.7   4.9    1.3e-11   30.0   0.2    3.1  3  VIMSS3788406  


Domain annotation for each sequence (and alignments):
>> VIMSS3788406  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   30.0   0.2   1.3e-11   1.3e-11      11     172 ..      27     173 ..      15     218 .. 0.71
   2 ?   -4.4   5.0      0.39      0.39     105     158 ..     330     372 ..     298     442 .. 0.54
   3 !   15.2   0.9   4.2e-07   4.2e-07     168     377 ..     592     790 ..     565     793 .. 0.68

  Alignments for each domain:
  == domain 1  score: 30.0 bits;  conditional E-value: 1.3e-11
       DUF3533  11 ailsiywGalykrsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenateal 105
                    + +i+  ++++   +++nl+v+vVn+D+   +s+ + ++g+ + + l+e+k+    +++++       ++e+ ++ + k +y+++++ + + +e+ 
  VIMSS3788406  27 LYNVIFLSSMWDPYGQVENLPVAVVNQDKAvtSSGKTLAIGDDLVSSLKENKN---LDFHFV-------SKEDAKNGLKKGDYYMVVTLPSDLSERA 113
                   345899************************98888888888888888888883...566666.......789999********************** PP

       DUF3533 106 yaalasangassynst.dllelvyesgrdptnvksyilpilqaleaaalakyssellqslikslsnss 172
                    + l+ + ++ + + + +   ++++  ++ ++++s  ++ +q++++++++++ +++ +         +
  VIMSS3788406 114 ASVLSGEPKQMKIDYQiSSGRSFIAGKMSDSAMTSLKQTVAQNVTNTYTSALLKNMGE--------LK 173
                   ****777766555544444444445555555555555555555555555555555543........33 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 0.39
       DUF3533 105 lyaalasangassynstdllelvyesgrdptnvksyilpilqaleaaalakyss 158
                   ++a+l s ++as+ n ++ l+ + +s+++  n ++++++++            +
  VIMSS3788406 330 IQASL-SGTSASTANIEASLTNIAASAQNIINDNQAVKTAAL----------AN 372
                   33444.444444455555555555555554444444444332..........22 PP

  == domain 3  score: 15.2 bits;  conditional E-value: 4.2e-07
       DUF3533 168 lsnssqaallanllasplafnsiDlrPft.davllaplqvgliyliiltffqlallgklhaqma...srklkfkqllvyRllisvislfvlSLffsl 260
                   ls+ ++ + +a++la+pl++ + D  +++ +++ +ap      y+i ++ f  a+ +++  + +   +++   ++++  Rl ++++   v +  + +
  VIMSS3788406 592 LSTVTTKEDNAKILADPLSLHKTDRDKVEkNGIGMAP------YMISVALFVAAISTNIIFSTLpsgKEPKTKWEWFKARLEVNGVISVVAGVLVYA 682
                   33333333333499************99725677888......55555555555544444444444477888999******9999888888777777 PP

       DUF3533 261 vslafqvdftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.PlhniveilkvIf 356
                   +  + +  ++ +        +++i    m+ + l++  v+      +    + ++l++  l+ s +++Plel ++ +++   + P++++v +l++ +
  VIMSS3788406 683 AVHLIGLSANHELAT-----LGLIVLTSMTFMALVTALVTWDS---KLGAFASLILLLLQLASSAGTYPLELTNKIFQVINPWlPMSYSVSGLRQTI 771
                   777778888555555.....55554444444444444333333...555558888888999*****************************9999766 PP

       DUF3533 357 fdtskgqlgrnlGiLfaWvvv 377
                   + +   q+g ++G L++ +v+
  VIMSS3788406 772 SMGG--QIGGQVGFLMIVLVL 790
                   5443..477777777766665 PP



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