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Align VIMSS3788406 to PF12051 (DUF3533)

VIMSS3788406 has 807 amino acids

Query:       DUF3533  [M=378]
Accession:   PF12051.8
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-16   46.1   5.5      1e-12   33.7   0.4    3.1  3  VIMSS3788406  


Domain annotation for each sequence (and alignments):
>> VIMSS3788406  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   33.7   0.4     1e-12     1e-12      12     171 ..      28     173 ..      15     220 .. 0.73
   2 ?   -4.4   5.5      0.38      0.38     107     170 ..     332     385 ..     296     441 .. 0.55
   3 !   23.6   0.7   1.2e-09   1.2e-09     162     376 ..     584     791 ..     557     793 .. 0.76

  Alignments for each domain:
  == domain 1  score: 33.7 bits;  conditional E-value: 1e-12
       DUF3533  12 ilslywGalyrrsdrlknlnvlvVneDeg..gseltpvvgeavaqainettssslgtwtvvnpsefkeseeeveelvhkekywgaivvkenatekly 106
                   + +++  ++ ++  +++nl+v+vVn+D+   +s+ t ++g+ + + ++e+++    ++++v       s+e+ ++ + k++y+++++ +++ +e+  
  VIMSS3788406  28 YNVIFLSSMWDPYGQVENLPVAVVNQDKAvtSSGKTLAIGDDLVSSLKENKN---LDFHFV-------SKEDAKNGLKKGDYYMVVTLPSDLSERAA 114
                   33699************************98778888888888887887773...666666.......7999************************* PP

       DUF3533 107 aal.sangassynstelleliyesgRdattvssyilpaltqleaaalakygsqllqqliqslsnta 171
                   + l  + ++        +++ + sgR+     ++  +a+t+l++++++++++++++ l++++ + +
  VIMSS3788406 115 SVLsGEPKQ------MKIDYQISSGRS-FIAGKMSDSAMTSLKQTVAQNVTNTYTSALLKNMGELK 173
                   ***444444......456666777775.34445555566666666666666666666666554433 PP

  == domain 2  score: -4.4 bits;  conditional E-value: 0.38
       DUF3533 107 aalsangassynstelleliyesgRdattvssyilpaltqleaaalakygsqllqqliqslsnt 170
                   a+ls ++as+ n ++ l          t+++++ ++++++ +a+ +a++ +   +++ qsls+ 
  VIMSS3788406 332 ASLSGTSASTANIEASL----------TNIAASAQNIINDNQAVKTAALANVQGTSAYQSLSEE 385
                   22233333333333333..........3333333333333333333333333333333333333 PP

  == domain 3  score: 23.6 bits;  conditional E-value: 1.2e-09
       DUF3533 162 qliqslsntaqaaqlsna..llaspiafnsidlrPft.dgvalaplqvgliyliiltffqfaflgklhaemg..lsrklkfkqllvyrllisvvslf 253
                    l+++ ++ +++ + +++  +la+p+++ + d  +++ +g+++ap      y+i ++ f  a+ +++  + +   +++   ++++  rl +++v   
  VIMSS3788406 584 GLTEAGDKLSTVTTKEDNakILADPLSLHKTDRDKVEkNGIGMAP------YMISVALFVAAISTNIIFSTLpsGKEPKTKWEWFKARLEVNGVISV 674
                   56666666666666555567***************9725788888......555555555444444444444433667788999999*******999 PP

       DUF3533 254 vlSlffslvslafqvdftvafGragFvvyWmitwlvmaavglanenvasilgppylpvwllfwvilNvsstfvPlelspgFYrygyal.Plhnivei 349
                   v ++++ ++  + ++ +    ++ +++++++i    m+ + l++  v+   +    +  +l++  l+ s +++Plel ++ ++    + P++++v +
  VIMSS3788406 675 VAGVLVYAAVHLIGLSA----NH-ELATLGLIVLTSMTFMALVTALVTWDSKLGAFASLILLLLQLASSAGTYPLELTNKIFQVINPWlPMSYSVSG 766
                   99999999999999999....44.88888988888888888888777777788888888899999******************************** PP

       DUF3533 350 lrvIffdtakgqlgrnlgiLlawvvvn 376
                   lr+ ++ +  gq+g ++g L++ +v+ 
  VIMSS3788406 767 LRQTISMG--GQIGGQVGFLMIVLVLF 791
                   *9765433..34788888877777765 PP



Or compare VIMSS3788406 to CDD or PaperBLAST