VIMSS4040477 has 896 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.6e-10 24.5 21.2 7.9e-10 24.2 0.1 3.4 3 VIMSS4040477
Domain annotation for each sequence (and alignments):
>> VIMSS4040477
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.2 0.1 7.9e-10 7.9e-10 18 166 .. 41 183 .. 20 210 .. 0.67
2 ! 1.8 2.0 0.0051 0.0051 101 179 .. 367 443 .. 354 466 .. 0.82
3 ! 5.6 7.9 0.00036 0.00036 284 378 .. 773 867 .. 638 869 .. 0.60
Alignments for each domain:
== domain 1 score: 24.2 bits; conditional E-value: 7.9e-10
DUF3533 18 GalykrsdrlknlnvlvVneDeg.......gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenatealya 107
al++ ++++ ++v+v + Deg ++ ++ vg+++++ l+++k + w+++ +e+e ++ v ky+++++++++++e++++
VIMSS4040477 41 EALWDPYSNTSGIKVAVSIDDEGaeidvpgKKPQQVNVGNQLKKTLEKNK---KLGWTFV-------SEDEAKKGVKSGKYYASIHIPKDFSEDMVS 127
57788888899999999999999888755444444445555555555555...5669999.......69999************************* PP
DUF3533 108 alasangassynstdllelvyesgrdptnvksyilpilqaleaaalakyssellqslik 166
++++ ++++ + + + e + ++ p+ +s ++i+++++++++ ++s+ +l++++k
VIMSS4040477 128 VVNDNVTKPTIDYS-VNEKI--NAIAPKMTESGATTIVNQISSEFVGTVSKAVLEEFNK 183
**666666655555.22222..2333445566666666666666666666666665554 PP
== domain 2 score: 1.8 bits; conditional E-value: 0.0051
DUF3533 101 atealyaalasangassynstdllelvyesgrdptnvksyilpilqaleaaalakyssellqslikslsnssqaallan 179
+++y+ + +a ++ s ++++++ + +d +++++i++++ +le+ ++ ++ ++ +++li++l+++++ +++
VIMSS4040477 367 MADNIYQVT-EAIKNGSITPEQAITELKKMEQDIDSLQQMITKQTATLESLNE-TLPNKPFTDLIANLKTINSQLGAQK 443
567888888.777777899999999999********************99887.5999999999999999887665544 PP
== domain 3 score: 5.6 bits; conditional E-value: 0.00036
DUF3533 284 itwlvmlavglanenvasilvavgppylpfwllfwvilNvsptfvPlelspgFYryGyal.PlhniveilkvIffdtskgqlgrnlGiLfaWvvvn 378
+ +++++v++++ ++ l+ + ++++ll++ i + + +P+++sp F++ y + P+ ++v +++ +++ ++ ++ +L+++ ++
VIMSS4040477 773 LFSMFISVVFMTIVYTLVSLFNNVGKGIAIILLVLQI-SGAGGNFPIQVSPPFFQAIYPFlPFTYAVSLIRESVGGLYMPTVWIDMSVLAGFAILF 867
3344455555554443333334445566666655544.45779****************99***********999999999999999999988765 PP
Or compare VIMSS4040477 to CDD or PaperBLAST