VIMSS922160 has 949 amino acids
Query: DUF3533 [M=380]
Accession: PF12051.12
Description: Protein of unknown function (DUF3533)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-11 29.6 0.6 1.8e-11 29.6 0.6 3.6 4 VIMSS922160
Domain annotation for each sequence (and alignments):
>> VIMSS922160
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.6 0.6 1.8e-11 1.8e-11 22 158 .. 45 174 .. 21 212 .. 0.69
2 ? -3.4 1.8 0.2 0.2 127 137 .. 386 396 .. 325 463 .. 0.55
3 ? -2.7 0.7 0.12 0.12 125 176 .. 580 630 .. 563 653 .. 0.65
4 ! 9.6 3.9 2.2e-05 2.2e-05 173 357 .. 720 899 .. 689 916 .. 0.67
Alignments for each domain:
== domain 1 score: 29.6 bits; conditional E-value: 1.8e-11
DUF3533 22 krsdrlknlnvlvVneDeg..gselepvvgeavrdalnetkssslgtwkvinssefkeieeeieelvhkekyWgalvvkenatealyaalasa..nga 115
+ ++kn++v+vVneD+g +++ + vg+ +++ l++ +w+++ ++++ +++ +y++a++++e +t +++ l ++ + +
VIMSS922160 45 DPYGNTKNIKVAVVNEDKGdtVKDKNVNVGNKITNKLKKD---DNFDWQFV-------SRKKADHDLKMGDYYAAIYIPEKFTHQITGTLRKNpqQAD 132
556789*************763333333444444433333...35899999.......699999************************9965411555 PP
DUF3533 116 ssynstdllelvyesgrdptnvksyilpilqaleaaalakyss 158
++y+ ++ l+ + + + + +++++ +++++++++++ +
VIMSS922160 133 VEYKVNQKLNAIAPKMTN-AGTSAIVQKANEQFNETVTKALLD 174
667777777776655444.344455555555565555554443 PP
== domain 2 score: -3.4 bits; conditional E-value: 0.2
DUF3533 127 vyesgrdptnv 137
+ s+ d +++
VIMSS922160 386 TAISSEDVSAM 396
22233333333 PP
== domain 3 score: -2.7 bits; conditional E-value: 0.12
DUF3533 125 elvyesgrdptnvksyilpilqaleaaalakyssellqslikslsnssqaal 176
e++ ++g+d ++ lp +++ a + + +++ +++ +s+sn +++
VIMSS922160 580 ESILTTGKDRVETIQSALPVIEQRYMDAMS-IAQNYYPQFKQSVSNAASFIE 630
677778888666666666666665555554.788888888888888776655 PP
== domain 4 score: 9.6 bits; conditional E-value: 2.2e-05
DUF3533 173 qaallanllasplafnsiDlrPftdavllaplqvgliyliiltffqlallgklhaqma..srklkfkqllvyRllisvislfvlSLffslvs.lafqv 267
+ ++ an++a+p+++ + D+ P++d a++ ++ + i + l+ l + ++ + +++l +++ + + + + ++ +L++s ++++
VIMSS922160 720 DLKKQANVIANPINIDQKDIFPVKDY-GSASTPFYTALAIWVGALLLVSLLTTDNKHKslEPHLTTREIYLGKSGLFYTLGIIQALIVSIGDmVILKA 816
33444568999999999999999885.34444577777777766666666666555544588888888877776666666666666666544334444 PP
DUF3533 268 dftvafGragFvvyWmitwlvmlavglanenvasilvavgppylpfwllfwvi.lNvsptfvPlelspgFYryGyal.PlhniveilkvIff 357
++ + v+W i v++ + +++ +v +++ g p +++++f+v ++ +++P+++ p+F+++ + P+++++++l+
VIMSS922160 817 QV-----E---SVVWFIAISVFSSL-VFISIVYTLVSLLGNPGKAIAIIFLVLqIAGGGGTFPIQVTPEFFQVIHPYlPFSYSIDALREAVG 899
44.....2...36676655444433.3344555555566*********999863555569*************99877****9999998665 PP
Or compare VIMSS922160 to CDD or PaperBLAST