PaperBLAST – Find papers about a protein or its homologs

 

Align G5BUG1 to PF12130 (bMERB_dom)

G5BUG1 has 913 amino acids

Query:       bMERB_dom  [M=134]
Accession:   PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-44  136.9  18.5    3.3e-44  136.4  18.5    1.2  1  G5BUG1    


Domain annotation for each sequence (and alignments):
>> G5BUG1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  136.4  18.5   3.3e-44   3.3e-44       1     132 [.     752     882 ..     752     884 .. 0.98

  Alignments for each domain:
  == domain 1  score: 136.4 bits;  conditional E-value: 3.3e-44
  bMERB_dom   1 iqreleeieeelkeleergvelEkkLReseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteedkkree 100
                i+r+l++ie++l++le +g ++E++LR  +eg  ee++l+  wf+Lv++k+ l+r eseL++ +k q+Lee+q +le elr+l++k++  k+++d++re+
     G5BUG1 752 IDRQLQDIERQLDSLELKGITMEQQLR-AAEGAAEEDDLMVAWFQLVHKKQLLLRLESELMYKSKAQRLEERQLDLEGELRRLMAKPEGLKSPQDRRREQ 850
                789************************.5899******************************************************************** PP

  bMERB_dom 101 elleelveiVekRdelvesleedrlreeeede 132
                ell+++v++V++R+++v+ l+edrlre+eed+
     G5BUG1 851 ELLSQYVSTVNDRSDIVDILDEDRLREKEEDQ 882
                *******************************8 PP



Or compare G5BUG1 to CDD or PaperBLAST