NP_001092402.1 has 883 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-46 142.1 16.8 9.6e-46 141.4 16.8 1.3 1 NP_001092402.1
Domain annotation for each sequence (and alignments):
>> NP_001092402.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 141.4 16.8 9.6e-46 9.6e-46 1 132 [. 713 843 .. 713 845 .. 0.98
Alignments for each domain:
== domain 1 score: 141.4 bits; conditional E-value: 9.6e-46
bMERB_dom 1 iqreleeieeelkeleergvelEkkLReseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekteed 95
iqr++++ie++l++le +gv lEk+LR +eg+++e++l+ +wf Lv+ek+ l+r eseL++ a++q+Lee+q +le elr+l++k++ k+++d
NP_001092402.1 713 IQRQVQDIERQLDALELQGVGLEKRLR-AAEGDDSEDALMVDWFRLVHEKQLLLRLESELMYKARDQRLEEQQLDLEGELRRLMAKPEGLKSPQD 806
8**************************.5899*************************************************************** PP
bMERB_dom 96 kkreeelleelveiVekRdelvesleedrlreeeede 132
++re++ll+++v +V+ R++++++l+edrlre+eede
NP_001092402.1 807 RRREQDLLDQYVHTVNSRSDIIDFLDEDRLREQEEDE 843
************************************8 PP
Or compare NP_001092402.1 to CDD or PaperBLAST