NP_001099867.1 has 1047 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-33 101.1 23.4 2.8e-33 101.1 23.4 2.5 4 NP_001099867.1
Domain annotation for each sequence (and alignments):
>> NP_001099867.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.0 0.1 0.38 0.38 78 97 .. 480 499 .. 473 504 .. 0.70
2 ? -6.7 5.0 1 1 124 131 .. 855 862 .. 846 868 .. 0.41
3 ? -7.3 4.8 1 1 67 67 .. 872 872 .. 855 909 .. 0.50
4 ! 101.1 23.4 2.8e-33 2.8e-33 1 128 [. 918 1045 .. 918 1046 .. 0.96
Alignments for each domain:
== domain 1 score: -3.0 bits; conditional E-value: 0.38
bMERB_dom 78 qelrellekedsekteedkk 97
q+l ++++ke +k+++++
NP_001099867.1 480 QDLYDIMDKEHARKKSDETD 499
67889999998666555544 PP
== domain 2 score: -6.7 bits; conditional E-value: 1
bMERB_dom 124 rlreeeed 131
++ eeee+
NP_001099867.1 855 EEEEEEEE 862
22222222 PP
== domain 3 score: -7.3 bits; conditional E-value: 1
bMERB_dom 67 q 67
+
NP_001099867.1 872 L 872
1 PP
== domain 4 score: 101.1 bits; conditional E-value: 2.8e-33
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekt 92
iqr+l+eie+ ++ele +g +lE +LR es++ e++++ +le++++L+++kn+lv +e+eL+i+ +e++Lee+q++l++e+r + + e++ kt
NP_001099867.1 918 IQRRLNEIEAAMRELETEGMKLEVALRkESSSPEKQKKLWLEQLLQLIQKKNSLVTEEAELMITVQELDLEEKQRQLDHEFRGI-NREETLKT 1009
8**************************877888888999*******************************************96.6778**** PP
bMERB_dom 93 eedkkreeelleelveiVekRdelvesleedrlree 128
++d+ e+++l++l+++V++Rd+l+++ ee+rlre+
NP_001099867.1 1010 QADRLSEDRVLRKLLDVVNQRDALIQFQEERRLREM 1045
**********************************96 PP
Or compare NP_001099867.1 to CDD or PaperBLAST