NP_001178014.2 has 1997 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-48 149.0 29.1 4.4e-48 149.0 29.1 3.2 4 NP_001178014.2
Domain annotation for each sequence (and alignments):
>> NP_001178014.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -7.7 5.4 1 1 81 132 .. 898 948 .. 884 950 .. 0.59
2 ? -10.7 8.6 1 1 82 132 .. 995 1047 .. 975 1049 .. 0.55
3 ? -5.0 2.6 1 1 71 100 .. 1115 1144 .. 1108 1145 .. 0.73
4 ! 149.0 29.1 4.4e-48 4.4e-48 1 134 [] 1849 1983 .. 1849 1983 .. 0.98
Alignments for each domain:
== domain 1 score: -7.7 bits; conditional E-value: 1
bMERB_dom 81 rellekedsekteedkkreeelleelveiVekRdelvesleedrlreeeede 132
r++ ++e+ e +e++++e +l + +++ + d+ +s e++ + eeeede
NP_001178014.2 898 RSVRQVEELEEVPEETQAEHNL-SSVLDKGTEEDAASSSSESEMEEEEEEDE 948
5555666666666666666654.34444444556666666666666777776 PP
== domain 2 score: -10.7 bits; conditional E-value: 1
bMERB_dom 82 ellekedsekteedkkreeelleelveiVekRdelv..esleedrlreeeede 132
e e +++e ee+++ e ++l +i+ + d l +++ + +re+ee+e
NP_001178014.2 995 EEYEDDEEEYDEEEEESSEAGNKRLQQIITAADPLAiqADVHWTHIREREEEE 1047
44444555555555555556666666677666654311444455666666665 PP
== domain 3 score: -5.0 bits; conditional E-value: 1
bMERB_dom 71 eeqaeleqelrellekedsekteedkkree 100
+ q++++ +l+ +++ +++ek +++ k+ee
NP_001178014.2 1115 QSQTKVKADLELRVSENEEEKPSDTPKQEE 1144
457888999999998888888777777765 PP
== domain 4 score: 149.0 bits; conditional E-value: 4.4e-48
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR.eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekt 92
iqr+le++ee++++leergv +Ek+LR e g++++ +l++ewf+Lv+ekna+vr+eseL+i+a+e+eLe++q++l+qelre++++ed+ kt
NP_001178014.2 1849 IQRQLEQVEEKQRQLEERGVAVEKALRgEAGMGKKDDPKLMQEWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKT 1941
8**************************988899************************************************************ PP
bMERB_dom 93 eedkkreeelleelveiVekRdelvesleedrlreeeedeel 134
ee+ ++e+++l+e++e+Ve+Rd+lv lee+rlre+eed++l
NP_001178014.2 1942 EEELSEEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDL 1983
***************************************985 PP
Or compare NP_001178014.2 to CDD or PaperBLAST