SwissProt::F1RA39 has 1679 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-45 139.3 22.8 1.4e-44 137.6 22.8 2.0 1 SwissProt::F1RA39
Domain annotation for each sequence (and alignments):
>> SwissProt::F1RA39
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 137.6 22.8 1.4e-44 1.4e-44 1 133 [. 1530 1664 .. 1530 1665 .. 0.98
Alignments for each domain:
== domain 1 score: 137.6 bits; conditional E-value: 1.4e-44
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR..eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrelleked 88
iqr+lee+ee++++lee+gv lEk LR + ++g+++e++ll++wf+Lv ekn+l r+eseL+i+a+e+eLe+ q++l+q+lr+++++ed
SwissProt::F1RA39 1530 IQRQLEEVEEKQRSLEEKGVALEKVLRgeNGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATED 1619
8**************************997789999****************************************************** PP
bMERB_dom 89 sekteedkkreeelleelveiVekRdelvesleedrlreeeedee 133
+ek++++ +e+++l e++++VekRd+lv+ lee+rl+e++ed++
SwissProt::F1RA39 1620 CEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRD 1664
*******************************************87 PP
Or compare SwissProt::F1RA39 to CDD or PaperBLAST