XP_003201274.1 has 1214 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-44 135.6 18.7 1.9e-43 134.0 18.7 2.0 1 XP_003201274.1
Domain annotation for each sequence (and alignments):
>> XP_003201274.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 134.0 18.7 1.9e-43 1.9e-43 1 131 [. 1066 1194 .. 1066 1197 .. 0.97
Alignments for each domain:
== domain 1 score: 134.0 bits; conditional E-value: 1.9e-43
bMERB_dom 1 iqreleeieeelkeleergvelEkkLReseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsekte 93
iqr+leeie+++kelee+gvelE++LR+ e+ + + e++ +w+eLv+ekn+l+++es+L++ ++++eLe++q++le elr+++e++dsek++
XP_003201274.1 1066 IQRRLEEIEVTFKELEEKGVELERALRG--ETGTGDPEIIDQWIELVQEKNNLLSEESDLMVASRQLELEDKQSMLEMELRRYMEMDDSEKSP 1156
8**************************5..77999********************************************************** PP
bMERB_dom 94 edkkreeelleelveiVekRdelvesleedrlreeeed 131
e++k+e e+l+e++++V++Rd+lv +lee+rl+e +++
XP_003201274.1 1157 EQQKHEAEILQEMLDVVDMRDSLVAFLEEKRLKEVNDQ 1194
*********************************99876 PP
Or compare XP_003201274.1 to CDD or PaperBLAST