XP_005174396.1 has 1679 amino acids
Query: bMERB_dom [M=134]
Accession: PF12130.12
Description: Bivalent Mical/EHBP Rab binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-45 139.3 22.8 1.4e-44 137.6 22.8 2.0 1 XP_005174396.1
Domain annotation for each sequence (and alignments):
>> XP_005174396.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 137.6 22.8 1.4e-44 1.4e-44 1 133 [. 1530 1664 .. 1530 1665 .. 0.98
Alignments for each domain:
== domain 1 score: 137.6 bits; conditional E-value: 1.4e-44
bMERB_dom 1 iqreleeieeelkeleergvelEkkLR..eseegeeeeeelleewfeLvneknalvrreseLvilakeqeLeeeqaeleqelrellekedsek 91
iqr+lee+ee++++lee+gv lEk LR + ++g+++e++ll++wf+Lv ekn+l r+eseL+i+a+e+eLe+ q++l+q+lr+++++ed+ek
XP_005174396.1 1530 IQRQLEEVEEKQRSLEEKGVALEKVLRgeNGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEK 1622
8**************************997789999********************************************************* PP
bMERB_dom 92 teedkkreeelleelveiVekRdelvesleedrlreeeedee 133
++++ +e+++l e++++VekRd+lv+ lee+rl+e++ed++
XP_005174396.1 1623 SASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRD 1664
****************************************87 PP
Or compare XP_005174396.1 to CDD or PaperBLAST