SwissProt::Q5AHD6 has 694 amino acids
Query: BMT [M=486] Accession: PF12141.12 Description: Beta-mannosyltransferases Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-192 625.4 0.0 4.1e-192 625.1 0.0 1.1 1 SwissProt::Q5AHD6 Domain annotation for each sequence (and alignments): >> SwissProt::Q5AHD6 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 625.1 0.0 4.1e-192 4.1e-192 1 486 [] 117 642 .. 117 642 .. 0.97 Alignments for each domain: == domain 1 score: 625.1 bits; conditional E-value: 4.1e-192 BMT 1 kCeelkselklevskaknlkadlekilkkllkele..nseylkelkkffkeelkeqlkektiekhwyrlagssvwLeqygvhlmvsRvlysk 90 +C+ l+s++++ev++a n++a+l++il kll++++ + eyl+e+++ff +el+ ql+ ++++++wyr+ gss+wL+qy++++m+sR+ ys+ SwissProt::Q5AHD6 117 QCQLLSSSSQVEVNDAVNMDASLHDILGKLLQDIRhgKLEYLQEIAPFFLPELQLQLNLNIVDRFWYRFSGSSIWLDQYNMYFMISRIAYSP 208 7*******************************99866789**************************************************** PP BMT 91 kgkknkpvlSllYaqvfdenWkelenveLvvpteekekke.ekkfkkvkfPsflpipfyhnvkktkkryyGpEDpRillvknekgyeEPliv 181 +g kn+pv+Sl+Y q+fd+nW+e++n++L+vp+++++k+ +++f+ ++fP+flpipf+h++++t+++y+GpEDpR++lv+n++gyeEPl++ SwissProt::Q5AHD6 209 HGVKNQPVVSLTYGQLFDRNWNEVKNINLLVPSNDPSKNGgHDSFRIISFPYFLPIPFWHDIDNTDGNYFGPEDPRLILVRNKQGYEEPLLI 300 ***********************************9887768************************************************** PP BMT 182 fNsyhrkikkakeeedkklevklefyRsmflawpfqtqkgkenvdeledekldnkeynkvkelkkenkerkkveKNWtpfiseeerkkkgyd 273 fNsyhrk+ +++++ed+ + +++f+Rsmf++wp+q+q+gk+nv+++++ ++dnk+yn+v+elk++ +k +KNWtpfise++ +k +d SwissProt::Q5AHD6 301 FNSYHRKFVHYDDDEDSIMGQTVKFQRSMFMCWPWQYQMGKSNVEGTSNPEYDNKVYNRVIELKVKLLADMKSQKNWTPFISEDSTNK--FD 390 **********************************************************************************887766..5* PP BMT 274 kkiyfvyrwenLeiLkCeleeaesseCefeykakk..kkkekvgplrGGtelininelleeslkkkl.pknreiwigfaRahlkkCGCgkkm 362 ++iyfvyrw+nL++LkC+l + ++C f+y+ ++ ++kvgplrGGt+l+n+++++++s+ ++l p++rei+igfaR+hl++CGCgk m SwissProt::Q5AHD6 391 SYIYFVYRWANLDVLKCSLLGDVAGDCVFDYRLDEtlVPQNKVGPLRGGTQLVNLRQVIPRSVYHRLlPSHREIFIGFARTHLDNCGCGKVM 482 **********************************989899********************98877665999********************* PP BMT 363 YRPnlvvlvkdke...kykishvssflsldievlgwk..kkeklCegknvlipngissweiekdk......kakleDyltltlsvaDetvel 443 YRPnlv+lvkd +ykish+ss+ls+d++++gw+ k+++lC ++nvlip+++s+w+i++ + ++ ++D+ltltls++D+tv+ SwissProt::Q5AHD6 483 YRPNLVILVKDAAdktYYKISHISSSLSFDVPIIGWNvyKPDDLCFDSNVLIPYSVSNWNITSLEldieggRWVSNDQLTLTLSISDSTVHR 574 **********9887889********************99***********************99999***99******************** PP BMT 444 ihikgllkail.........................leeeeksekeeekkkeknnknikCalkeskef 486 ++i+gl+++il ++ ++ +++ ++ + nn+ni Cal++s ef SwissProt::Q5AHD6 575 LDIRGLFQSILdladrslfipvdretrvidefqnglQNPGSNPLNQDVNSLGVNNDNIVCALDASVEF 642 ********************************9996578888899999*****************998 PP
Or compare SwissProt::Q5AHD6 to CDD or PaperBLAST