PaperBLAST – Find papers about a protein or its homologs

 

Align XP_041409102.1 to PF12141 (BMT)

XP_041409102.1 has 650 amino acids

Query:       BMT  [M=486]
Accession:   PF12141.12
Description: Beta-mannosyltransferases
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-83  266.8   3.5    1.5e-54  171.4   0.0    2.7  2  XP_041409102.1  


Domain annotation for each sequence (and alignments):
>> XP_041409102.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   88.8   6.8   1.7e-29   1.7e-29       1     185 [.     147     368 ..     147     373 .. 0.84
   2 !  171.4   0.0   1.5e-54   1.5e-54     243     483 ..     391     633 ..     382     636 .. 0.86

  Alignments for each domain:
  == domain 1  score: 88.8 bits;  conditional E-value: 1.7e-29
             BMT   1 kCeelkselklevskak.nlkadlekilkkllkelenseylkelkkffkeelkeqlkektiekhwyrlagssvwLeqygvhlmvsRvlyskkgkk 94 
                     +C++l+ ++++e sk++  ++ +l +  ++l+++  ++    e+++    + k++ +e+++ek+w+ + gs++wLe+ +++l+ sR++ys+ ++k
  XP_041409102.1 147 SCQDLSYNSHMEYSKNAiVMDDNLLSTRRELIRK--HNWLSPEIQDEK--HDKHMTEEEIVEKQWFSFGGSAIWLESEQCYLVYSRIVYSRMNRK 237
                     59**********9987625788899999999988..777777887764..34566789999********************************** PP

             BMT  95 nkpvlSllYaqvfdenWkelenveL...vvpteekekke...........................................ekkfkkvkfPsfl 143
                     n+p lSl+  q fd+nW+e+   ++    v + ++ ++e                                             +   +++P+++
  XP_041409102.1 238 NHPHLSLVRGQAFDKNWNEIFGKNIsylDVIKPKNIESElrklnselnpencellnfnsleyeacktrqvrnklkvdlkkekILSRYVISYPTII 332
                     *******************96544311133333333333679***********************************997633566789****** PP

             BMT 144 pipfyhnvkktkkryyGpEDpRillvknekgyeEPlivfNsy 185
                     +ipf  n       y GpED+R++l+ + +g eEP+++fN+ 
  XP_041409102.1 333 EIPFSPNN-----DYRGPEDARVILR-SVNGIEEPVLLFNMD 368
                     ****8765.....799*******997.789**********96 PP

  == domain 2  score: 171.4 bits;  conditional E-value: 1.5e-54
             BMT 243 elkkenkerkkveKNWtpfiseeerkkkg.ydkkiyfvyrwenLeiLkCeleeaesseCefeykakk...kkkekvgplrGGtelininellees 333
                      +  ++++ k  eKNWtpf++++  +++      iyf+y+++ Lei+kC+l+   +++C+++++ ++   ++++++g +rGGt++i++ + l+  
  XP_041409102.1 391 RFSLSEHKLKGSEKNWTPFFHPDIGTESLlSRGFIYFIYTFSPLEIFKCSLN---DGSCDIVFDGQTldiDDSDSFGGMRGGTQFISLPKALP-- 480
                     56677889999**********9988887526679*****************9...578*****9998889999***************98887.. PP

             BMT 334 lkkklpknreiwigfaRahlkkCGCgkkmYRPnlvvlvkdkekykishvssflsldievlgwkkkeklCeg.knvlipngissweiekdk..kak 425
                           +n++iwigf++ h+++CGC++++YRP l +lv+++  y+ + v   ++++i+vl+w+ k + C + +n+l pn+i++w+i +++  +++
  XP_041409102.1 481 ----ALQNKNIWIGFPKLHITDCGCSHRFYRPMLDLLVESDGVYHQELVVPAVDFGIDVLSWDLKGTDCGSdTNILSPNSIAYWDIVDQDpvTKQ 571
                     ....5799*******************************************************999999888**************988778999 PP

             BMT 426 leDyltltlsvaDetvelihikgllkail....leeeeksekeeekkkeknnknikCalkes 483
                     +eDyl l++s aD+  ++i+++g+l+++l    +++ e++ + ++++     k+ +C ++e+
  XP_041409102.1 572 FEDYLVLSVSEADTVTKIITLRGVLNYVLgiyaHQDIEENFSITDQSRDIIGKTFSCLVHEA 633
                     *****************************655422222333333444444455666666665 PP



Or compare XP_041409102.1 to CDD or PaperBLAST