NP_010108.1 has 295 amino acids
Query: DUF3602 [M=80]
Accession: PF12223.12
Description: Protein of unknown function (DUF3602)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7e-23 67.4 19.5 3.7e-13 36.2 4.4 4.4 4 NP_010108.1
Domain annotation for each sequence (and alignments):
>> NP_010108.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.2 4.4 3.7e-13 3.7e-13 23 80 .] 12 77 .. 2 77 .. 0.72
2 ! 20.4 0.4 3.3e-08 3.3e-08 14 62 .. 52 96 .. 43 102 .. 0.68
3 ! 14.6 1.9 2.2e-06 2.2e-06 16 49 .. 141 173 .. 121 197 .. 0.58
4 ! 19.9 0.4 4.6e-08 4.6e-08 9 51 .. 215 255 .. 207 283 .. 0.71
Alignments for each domain:
== domain 1 score: 36.2 bits; conditional E-value: 3.7e-13
DUF3602 23 ktdgsrt.afstGRGGaGNihssdgerpe......trkdedvereearrk..eeaeelhvGRGGaGN 80
++ +++ ++stGRGGaGNih+s ++p+ +++++ v+++++ e+ + + +GRGGaGN
NP_010108.1 12 NQARVQEyKVSTGRGGAGNIHKSM-SKPSpvllplKSNSKTVANNNNNGSnqEKVPRFAIGRGGAGN 77
333444579************766.7776678887777777777666544346678888*******9 PP
== domain 2 score: 20.4 bits; conditional E-value: 3.3e-08
DUF3602 14 ivrtgpqgsktdgsrt.afstGRGGaGNihssdgerpe.trkdedvereea 62
+ + + +gs++++ +f GRGGaGNi +++ + tr ++++ +++
NP_010108.1 52 VANNNNNGSNQEK--VpRFAIGRGGAGNIFHDP----HlTRSAQQLDSNDN 96
3445556666665..24*************544....54777777776655 PP
== domain 3 score: 14.6 bits; conditional E-value: 2.2e-06
DUF3602 16 rtgpqgsktdgsrtafstGRGGaGNihssdgerp 49
++++ +++++++ + GRGGaGNi ++++ +
NP_010108.1 141 SLHAT-TSSPNNNAPIVVGRGGAGNIFFNKKKVA 173
22222.2222223377788888888876665544 PP
== domain 4 score: 19.9 bits; conditional E-value: 4.6e-08
DUF3602 9 ytdgeivrtgpqgsktdgsrtafstGRGGaGNihssdgerpe.t 51
+++++ + + +g+++++ +f GRGGaGNi s +++r +
NP_010108.1 215 KSTSKKPKNKLKGKSAPE---KFAIGRGGAGNIISPKSSRNTiN 255
445555566777777777...*************7666665542 PP
Or compare NP_010108.1 to CDD or PaperBLAST