NP_001141092.1 has 296 amino acids
Query: DUF3611 [M=177]
Accession: PF12263.12
Description: Protein of unknown function (DUF3611)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.8e-56 174.6 3.6 1.2e-55 174.3 3.6 1.1 1 NP_001141092.1
Domain annotation for each sequence (and alignments):
>> NP_001141092.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 174.3 3.6 1.2e-55 1.2e-55 1 176 [. 89 264 .. 89 265 .. 0.93
Alignments for each domain:
== domain 1 score: 174.3 bits; conditional E-value: 1.2e-55
DUF3611 1 spalqriasalrllGwigFWlqlvlgvvsalillfallgrslaeesnaglgfglflavlglvlllfsifwafrytrlarrL..qaenpelrPkka 93
s++l+++a++++ +G +gFW+qlv++vvsa il f++++++ n ++ f++ +++g+v++++ +f +f+y+rl++rL +a++p+++P++a
NP_001141092.1 89 SKKLEKTARHFKNVGTLGFWSQLVCTVVSAGILSFSAVATG-----NVTAPFTFSATAVGIVVAFICVFRSFGYIRLSERLkrTANDPSKAPPRA 178
5799************************************8.....99*********************************99999********* PP
DUF3611 94 evlqllrlGlivnlvGmllallgaqatvglLlakalsq...pqgvavidp.sklvralDvlvvqAntntilAhfvGlvvsLwLleri 176
+v++ lr+++++n+vGm +a+lg+qatvg+L+ kal++ p + i p ++ v alD+++vqA++ntil+hf+Gl +sL Ll+++
NP_001141092.1 179 DVVNNLRNSIVLNVVGMAAAVLGLQATVGALVGKALTTslvP-YYQGIPPgQSPVLALDIFLVQASANTILSHFLGLSSSLELLRSV 264
**************************************5542.22333334789*******************************98 PP
Or compare NP_001141092.1 to CDD or PaperBLAST