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Align NP_571093.1 to PF12372 (Htt_N-HEAT)

NP_571093.1 has 3121 amino acids

Query:       Htt_N-HEAT  [M=851]
Accession:   PF12372.12
Description: Huntingtin, N-terminal HEAT
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
          0 1018.6   5.3          0 1017.6   5.3    1.5  1  NP_571093.1  


Domain annotation for each sequence (and alignments):
>> NP_571093.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ! 1017.6   5.3         0         0       1     850 [.     708    1605 ..     708    1606 .. 0.95

  Alignments for each domain:
  == domain 1  score: 1017.6 bits;  conditional E-value: 0
   Htt_N-HEAT    1 yanhsDpqlrgvvllllekfikavlsqqvllyerwlqslesiknrkaqdldalvklllkgLkdessgtlrlaisavesClrnLadSkeflqlLqll 96  
                   y +h D q+rg++++l++ +i+a+  +++++ e wl++++s ++ ++++l+++v ll++ Lkdess+t+++a+ av++C+  L++ + ++++Lqll
  NP_571093.1  708 YIEHGDHQIRGATAILCGALIQAIQLKTRYNTETWLSQIQSVTG-SSVTLENFVPLLQRSLKDESSVTCKMACAAVRHCIMALCNGSLSELGLQLL 802 
                   679****************************************9.99************************************************* PP

   Htt_N-HEAT   97 iellalktsaywlvkvellellaklkyvlve..............nitassrlqervldsvliallqdedprvrsaaaaaivkaipkLfyktrs.e 177 
                   i+ll lk+ +ywlv++elle+la+++++l++              ++t+  rlq+rvl++v+++ll+dedprvr++aa++i +++p+Lf+ +++ +
  NP_571093.1  803 IDLLTLKNCSYWLVRTELLETLAEIDFRLISflerkteklhkgehHYTGLLRLQDRVLNDVVLYLLGDEDPRVRHVAANTIGRLVPRLFFDCDQgQ 898 
                   ************************************************************************************************ PP

   Htt_N-HEAT  178 edeitakAkelsekllscltellveleshd...slisaaskayslLakrsnvcrtkdalesslSrivcklselLlvsaskalllgCleallalsle 270 
                    d ++a A+++s+  l+ l++ ++    ++   s+i++ ++++ l ++       + ++e++lSr+++++s+ L+ s+s+a+++gC+eal+ ls +
  NP_571093.1  899 TDPVVAIARDQSSVHLQLLMHETQPP--SQftvSTITRTYRGFNLCQS-----APDVTVENNLSRVITAISHALTSSTSRAMTFGCCEALCLLSST 987 
                   *******************9655332..33334666666666666666.....7788*************************************** PP

   Htt_N-HEAT  271 ypvalyekaWgckv.........ksklkrd...........asvakdesaqqvelgllslvlsLLsssylnfdltaHldlLilagnLlagaalrni 346 
                   +pv+ ++++W+c           +s    +            s  ++e + + ++g++s+vlsL+ss+++++dl+aH+ +L+lagnLla++a + +
  NP_571093.1  988 FPVCNWSTGWHCGFvsssvfhlnRSS---QyrsrgrsfslsQSGSNEEVRRSLTVGVASMVLSLISSAWFPLDLSAHQAALLLAGNLLAAVAPKCM 1080
                   ************98899988776333...13346788998878889999*********************************************** PP

   Htt_N-HEAT  347 k..lsdsepsk.........WdalsdtvlvrlaeqllrhvlrllnilaevlddvtpgqatkdalpslqalqvlSplkrlkeeekkekepserlarr 431 
                   k   +++e+s+         W+al+d+ lv ++eql++h+l++lni+a+vldd +pg+a k+ lpsl+++++lSp++r    + kek  +e  ++ 
  NP_571093.1 1081 KspWAGEEESSpasskveepWPALNDRSLVVMVEQLFSHLLKILNICAHVLDDTPPGPAVKASLPSLANTPSLSPIRR----KGKEKDMMEAGTT- 1171
                   *995555555558899**************************************************************....8899999997775. PP

   Htt_N-HEAT  432 qssparngi..............vakkeslGsFlhvphylrlyeiLkaaysnYkvtLaggeaedkfaslLlkdLevfsqllelAtlqedgkiaeev 513 
                   ++sp++ g+              v+k+ +lGsF+h+p yl+ly+ L+a+++nYkvtL+  + ++kf ++L+++L+v+sqllelAtl+++gk++ee+
  NP_571093.1 1172 PMSPKKGGEtntgraadstataaVNKSTTLGSFYHLPPYLKLYDALRATHANYKVTLDLHNPNEKFGGFLRSALDVLSQLLELATLHDIGKCVEEI 1267
                   99999999999999********9************************************************************************* PP

   Htt_N-HEAT  514 LmylkleiqsepkatvrcvqqLLksLFgtNlasnls.....pskqearllRealagslaamlsgfyhkifqhPlarvsealrvansss.skvqaee 603 
                   L+ylk+++++ep++++ cvqqLLk+LFgtNlas+++     p +++ ++lR   ++s+   ++g+yh++f++P++++++al  a++s  ++vqae+
  NP_571093.1 1268 LGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEgassnPCRSQGKALR-LGSSSV---RPGLYHYCFMAPYTHFTQAL--ADASLrNMVQAEQ 1357
                   ***********************************9988887888888888.678888...9*******************..8888889*****9 PP

   Htt_N-HEAT  604 eae...wlgllkkkslkvarklaavlkgvrndektilnyIRlfEklviksLkqYtvtssvelqkqvleLLaqLvqlrvnyclldsdqvfigfvLkq 696 
                   e++   w+++++k+s +  + +++v+   r d+++i+n+IRlfE+lvik+LkqYt+ +sv+lq+qvl+LLaqLvqlrvnyclldsdqvfigfvLkq
  NP_571093.1 1358 EQDasgWFDVMQKVSNQLRSSITNVTR-HRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQ 1452
                   99999******************9988.9******************************************************************* PP

   Htt_N-HEAT  697 feyiEeGqvresedlipkiFqFLvlLSyeryhskaiigipkiiqlcdglmasgqravthciPAlqPivediFlvRnslkaeeakeleaqrevvlak 792 
                   feyiE+Gq+r+se+++p+iF+FLvlLSyeryhsk+ii ipkiiqlcdg+masg++avth+iPAlqPiv+d+F++R+s+ka+++kele+q+evv+++
  NP_571093.1 1453 FEYIEVGQFRDSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSM 1548
                   ************************************************************************************************ PP

   Htt_N-HEAT  793 LlrLleyhevvellilildscrveaneekwkrasrqvadvvLpllaklkisldsthql 850 
                   LlrL+++h+v+e++il+l++c++e ne+kwkr+srqvad++Lp+++k++++lds+++l
  NP_571093.1 1549 LLRLIQHHQVLEMFILVLQQCHKE-NEDKWKRLSRQVADIILPMIGKQQMHLDSHEAL 1605
                   ************************.*******************************97 PP



Or compare NP_571093.1 to CDD or PaperBLAST