XP_005160073.1 has 3115 amino acids
Query: Htt_N-HEAT [M=851]
Accession: PF12372.12
Description: Huntingtin, N-terminal HEAT
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
0 1019.3 6.0 0 1018.2 6.0 1.6 1 XP_005160073.1
Domain annotation for each sequence (and alignments):
>> XP_005160073.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 1018.2 6.0 0 0 1 850 [. 708 1605 .. 708 1606 .. 0.95
Alignments for each domain:
== domain 1 score: 1018.2 bits; conditional E-value: 0
Htt_N-HEAT 1 yanhsDpqlrgvvllllekfikavlsqqvllyerwlqslesiknrkaqdldalvklllkgLkdessgtlrlaisavesClrnLadSkeflqlL 93
y +h D q+rg++++l++ +i+a+ +++++ e wl++++s ++ ++++l+++v ll++ Lkdess+t+++a+ av++C+ L++ + ++++L
XP_005160073.1 708 YIEHGDHQIRGATAILCGALIQAIQLKTRYNTETWLSQIQSVTG-SSVTLENFVPLLQRSLKDESSVTCKMACAAVRHCIMALCNGSLSELGL 799
679****************************************9.99********************************************** PP
Htt_N-HEAT 94 qlliellalktsaywlvkvellellaklkyvlve..............nitassrlqervldsvliallqdedprvrsaaaaaivkaipkLfy 172
qlli+ll lk+ +ywlv++elle+la+++++l++ ++t+ rlq+rvl++v+++ll+dedprvr++aa++i +++p+Lf+
XP_005160073.1 800 QLLIDLLTLKNCSYWLVRTELLETLAEIDFRLISflerkteklhkgehHYTGLLRLQDRVLNDVVLYLLGDEDPRVRHVAANTIGRLVPRLFF 892
********************************************************************************************* PP
Htt_N-HEAT 173 ktrs.eedeitakAkelsekllscltellveleshd...slisaaskayslLakrsnvcrtkdalesslSrivcklselLlvsaskalllgCl 261
+++ + d ++a A+++s+ l+ l++ ++ ++ s+i++ ++++ l ++ + ++e++lSr+++++s+ L+ s+s+a+++gC+
XP_005160073.1 893 DCDQgQTDPVVAIARDQSSVHLQLLMHETQPP--SQftvSTITRTYRGFNLCQS-----APDVTVENNLSRVITAISHALTSSTSRAMTFGCC 978
*************************9655332..33334666666666666666.....7788****************************** PP
Htt_N-HEAT 262 eallalsleypvalyekaWgckv.........ksklkrd...........asvakdesaqqvelgllslvlsLLsssylnfdltaHldlLila 334
eal+ ls ++pv+ ++++W+c +s + s ++e + + ++g++s+vlsL+ss+++++dl+aH+ +L+la
XP_005160073.1 979 EALCLLSSTFPVCNWSTGWHCGFvsssvfhlnRSS---QyrsrgrsfslsQSGSNEEVRRSLTVGVASMVLSLISSAWFPLDLSAHQAALLLA 1068
*********************98899988776333...13346788998878889999*********************************** PP
Htt_N-HEAT 335 gnLlagaalrnik..lsdsepsk.........WdalsdtvlvrlaeqllrhvlrllnilaevlddvtpgqatkdalpslqalqvlSplkrlke 416
gnLla++a + +k +++e+s+ W+al+d+ lv ++eql++h+l++lni+a+vldd +pg+a k+ lpsl+++++lSp++r
XP_005160073.1 1069 GNLLAAVAPKCMKspWAGEEESSpasskveepWPALNDRSLVVMVEQLFSHLLKILNICAHVLDDTPPGPAVKASLPSLANTPSLSPIRR--- 1158
*************995555555558899**************************************************************... PP
Htt_N-HEAT 417 eekkekepserlarrqssparngi..............vakkeslGsFlhvphylrlyeiLkaaysnYkvtLaggeaedkfaslLlkdLevfs 495
+ kek +e ++ ++sp++ g+ v+k+ +lGsF+h+p yl+ly+ L+a+++nYkvtL+ + ++kf ++L+++L+v+s
XP_005160073.1 1159 -KGKEKDMMEAGTT-PMSPKKGGEsntgraadstataaVNKSTTLGSFYHLPPYLKLYDALRATHANYKVTLDLHNPNEKFGGFLRSALDVLS 1249
.8999999997776.99**99999999**********9******************************************************* PP
Htt_N-HEAT 496 qllelAtlqedgkiaeevLmylkleiqsepkatvrcvqqLLksLFgtNlasnls.....pskqearllRealagslaamlsgfyhkifqhPla 583
qllelAtl+++gk++ee+L+ylk+++++ep++++ cvqqLLk+LFgtNlas+++ p +++ ++lR ++s+ ++g+yh++f++P++
XP_005160073.1 1250 QLLELATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEgassnPCRSQGKALR-LGSSSV---RPGLYHYCFMAPYT 1338
*****************************************************9988887888888888.678888...9************* PP
Htt_N-HEAT 584 rvsealrvansss.skvqaeeeae...wlgllkkkslkvarklaavlkgvrndektilnyIRlfEklviksLkqYtvtssvelqkqvleLLaq 672
++++al a++s ++vqae+e++ w+++++k+s + + +++v+ r d+++i+n+IRlfE+lvik+LkqYt+ +sv+lq+qvl+LLaq
XP_005160073.1 1339 HFTQAL--ADASLrNMVQAEQEQDasgWFDVMQKVSNQLRSSITNVTR-HRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQ 1428
******..8888889*****999999******************9988.9******************************************* PP
Htt_N-HEAT 673 LvqlrvnyclldsdqvfigfvLkqfeyiEeGqvresedlipkiFqFLvlLSyeryhskaiigipkiiqlcdglmasgqravthciPAlqPive 765
LvqlrvnyclldsdqvfigfvLkqfeyiE+Gq+r+se+++p+iF+FLvlLSyeryhsk+ii ipkiiqlcdg+masg++avth+iPAlqPiv+
XP_005160073.1 1429 LVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVH 1521
********************************************************************************************* PP
Htt_N-HEAT 766 diFlvRnslkaeeakeleaqrevvlakLlrLleyhevvellilildscrveaneekwkrasrqvadvvLpllaklkisldsthql 850
d+F++R+s+ka+++kele+q+evv+++LlrL+++h+v+e++il+l++c++e ne+kwkr+srqvad++Lp++ak++++lds+++l
XP_005160073.1 1522 DLFVLRGSNKADAGKELETQKEVVVSMLLRLIQHHQVLEMFILVLQQCHKE-NEDKWKRLSRQVADIILPMIAKQQMHLDSHEAL 1605
***************************************************.*******************************97 PP
Or compare XP_005160073.1 to CDD or PaperBLAST