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Align VIMSS1730120 to PF12469 (DUF3692)

VIMSS1730120 has 979 amino acids

Query:       DUF3692  [M=111]
Accession:   PF12469.8
Description: CRISPR-associated protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-42  131.0   0.1    1.4e-41  127.5   0.0    2.4  2  VIMSS1730120  


Domain annotation for each sequence (and alignments):
>> VIMSS1730120  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    0.3   0.0     0.044     0.044      38      60 ..     160     182 ..     152     203 .. 0.79
   2 !  127.5   0.0   1.4e-41   1.4e-41       1     110 [.     222     343 ..     222     344 .. 0.92

  Alignments for each domain:
  == domain 1  score: 0.3 bits;  conditional E-value: 0.044
                   HHHHHHT-GGGEEES--TT-HHH CS
       DUF3692  38 kelvekyGpdvliyPslrgnplv 60 
                   ++++e++Gp++l++P+    p  
  VIMSS1730120 160 EAVAEQFGPESLLMPAETRLPDA 182
                   6899***********87665555 PP

  == domain 2  score: 127.5 bits;  conditional E-value: 1.4e-41
                   EEEEEEEESHHHHHS-SSHHHHHHHHHHHHHHHHHHHHHHHHHT-GGGEEES--TT-HHHHHHTS---GG.............GGGSB---SEEEEE CS
       DUF3692   1 llvvsigpVqefIaaaRktrDlWagSyllSylawkaikelvekyGpdvliyPslrgnplvdawlleklee.............eletalipnrfvli 84 
                   l+v++++p+qe+I+a+Rk +D+WagS++l+yl++k+++el+++yGpd+++yPsl+g+pl+d+wllek+ e             +l ta++pn+++l+
  VIMSS1730120 222 LAVFTFSPIQELIKASRKIKDFWAGSWILHYLSAKVCWELAQQYGPDCFLYPSLYGQPLIDHWLLEKYGEqgfsqwvpqpgdrQLLTAGFPNVIMLV 318
                   679***************************************************************76667777777777788************** PP

                   EE.TTTHHHHHHHHHHHHHHHHHHHH CS
       DUF3692  85 lpkeeeaeelaeeveealkeawkeia 110
                   lpke+  +++ ++++++l +aw++ia
  VIMSS1730120 319 LPKEK-VSAAMQSAKNHLLNAWRNIA 343
                   **776.67788889**********98 PP



Or compare VIMSS1730120 to CDD or PaperBLAST