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Align VIMSS188834 to PF12469 (DUF3692)

VIMSS188834 has 871 amino acids

Query:       DUF3692  [M=111]
Accession:   PF12469.8
Description: CRISPR-associated protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-34  105.2   0.2    7.7e-34  102.5   0.0    2.4  2  VIMSS188834  


Domain annotation for each sequence (and alignments):
>> VIMSS188834  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.5   0.0   7.7e-34   7.7e-34       1     107 [.     221     327 ..     221     331 .. 0.91
   2 ?   -0.9   0.1      0.11      0.11      24      41 ..     755     772 ..     754     781 .. 0.87

  Alignments for each domain:
  == domain 1  score: 102.5 bits;  conditional E-value: 7.7e-34
                  EEEEEEEESHHHHHS-SSHHHHHHHHHHHHHHHHHHHHHHHHHT-GGGEEES--TT-HHHHHHTS.---GGGGGSB---SEEEEEEE.TTTHHHHHHH CS
      DUF3692   1 llvvsigpVqefIaaaRktrDlWagSyllSylawkaikelvekyGpdvliyPslrgnplvdawll.ekleeeletalipnrfvlilpkeeeaeelaee 97 
                  ll ++i pVq fIa++Rk  DlWa+S+llS+l++ka++++v+k+Gp+++iyPslr++p++ ++ l e++ +e  +a++pn++++i+ ++ eae+++ee
  VIMSS188834 221 LLRIKIVPVQPFIANSRKQLDLWASSHLLSMLMYKALEVIVDKFGPEHVIYPSLRDQPFFLKFYLgENIGDEILVANLPNKALAIVSGK-EAEKIEEE 317
                  6889******************************************************9877665378999****************66.58999999 PP

                  HHHHHHHHHH CS
      DUF3692  98 veealkeawk 107
                  +++++++ + 
  VIMSS188834 318 IKKRIRDFLL 327
                  9999998765 PP

  == domain 2  score: -0.9 bits;  conditional E-value: 0.11
                  HHHHHHHHHHHHHHHHHH CS
      DUF3692  24 agSyllSylawkaikelv 41 
                   gSy +S + w++i+++ 
  VIMSS188834 755 SGSYYISLVGWELIRVFY 772
                  69***********99886 PP



Or compare VIMSS188834 to CDD or PaperBLAST