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Align VIMSS2104407 to PF12469 (Cmr2_N)

VIMSS2104407 has 935 amino acids

Query:       Cmr2_N  [M=111]
Accession:   PF12469.12
Description: CRISPR-associated protein Cmr2, N-terminal
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-28   85.5   0.0    3.5e-28   84.2   0.0    1.7  1  VIMSS2104407  


Domain annotation for each sequence (and alignments):
>> VIMSS2104407  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   84.2   0.0   3.5e-28   3.5e-28       1     110 [.     180     320 ..     180     324 .. 0.81

  Alignments for each domain:
  == domain 1  score: 84.2 bits;  conditional E-value: 3.5e-28
        Cmr2_N   1 lvvvsigpVqefIaaaRktrDlWagSwllSylawkaieelveeyGpdvliyPslrgnplvdawlee.........................klse.. 70 
                   +v++++++Vq+f++a+Rk++D WagSw lS+ +w +++++++eyGpdvl++P++r np+++a+ ++                               
  VIMSS2104407 180 FVTLDVPGVQDFVKAGRKAGDIWAGSWALSMAVWLTVWPFAWEYGPDVLLRPTARLNPYYYAFAAArglgvehgvfakllspyvkgesfydL--Vnf 274
                   5899*************************************************************988888888877777766666555543..055 PP

        Cmr2_N  71 elktallpnkfvlilpkek.....eae..elaeeiekalkeawkeia 110
                   ++ ++l+ +++ ++lp  +       +    aee+++a+++++k+++
  VIMSS2104407 275 AVVQPLIGERAQIVLPPYRvegdkI-AswGGAEEVREAVRDRFKRAV 320
                   999*************887644331.134444557777777777655 PP



Or compare VIMSS2104407 to CDD or PaperBLAST