VIMSS2670 has 815 amino acids
Query: Cmr2_N [M=111]
Accession: PF12469.12
Description: CRISPR-associated protein Cmr2, N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-39 120.0 0.0 9.4e-39 118.2 0.0 2.0 2 VIMSS2670
Domain annotation for each sequence (and alignments):
>> VIMSS2670
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 118.2 0.0 9.4e-39 9.4e-39 1 110 [. 192 308 .. 192 309 .. 0.93
2 ? -3.2 0.0 0.49 0.49 71 104 .. 652 680 .. 635 683 .. 0.64
Alignments for each domain:
== domain 1 score: 118.2 bits; conditional E-value: 9.4e-39
Cmr2_N 1 lvvvsigpVqefIaaaRktrDlWagSwllSylawkaieelveeyGpdvliyPslrgnplvdawlee.........klseelktallpnkfvlilpkekea 91
lv+v igpVqe+Ia+aRk +DlWagS+llSyl++ aie++ ++yG d++i+P+lrgn++v+++le+ ++a+lpn fv+i+p+++
VIMSS2670 192 LVAVAIGPVQEVIAQARKVKDLWAGSYLLSYLIYGAIEVVGKKYGFDSIISPYLRGNYFVKETLESmgvdledlcPVPPRREVASLPNLFVAIVPSSD-- 289
799**************************************************************98887766664455999*************777.. PP
Cmr2_N 92 eelaeeiekalkeawkeia 110
ee+ +e+e+a++++wk i+
VIMSS2670 290 EEILKECEEAIRNRWKTIV 308
8***************998 PP
== domain 2 score: -3.2 bits; conditional E-value: 0.49
Cmr2_N 71 elktallpnkfvlilpkekeaeelaeeiekalke 104
+ +a+++ kf l++ ++a+e+ek++k+
VIMSS2670 652 SAGIAIVHHKFPLQVAL-----KIAREAEKRAKN 680
45567777777777663.....356666666665 PP
Or compare VIMSS2670 to CDD or PaperBLAST