biolip::3x1lA has 573 amino acids
Query: Cmr2_N [M=111]
Accession: PF12469.12
Description: CRISPR-associated protein Cmr2, N-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-37 113.7 0.0 3.3e-36 110.1 0.0 2.6 2 biolip::3x1lA
Domain annotation for each sequence (and alignments):
>> biolip::3x1lA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.1 0.0 3.3e-36 3.3e-36 1 108 [. 4 111 .. 4 114 .. 0.91
2 ? 0.3 0.0 0.04 0.04 24 42 .. 464 482 .. 463 544 .. 0.84
Alignments for each domain:
== domain 1 score: 110.1 bits; conditional E-value: 3.3e-36
Cmr2_N 1 lvvvsigpVqefIaaaRktrDlWagSwllSylawkaieelveeyGpdvliyPslrgnplvdawle.eklseelktallpnkfvlilpkekeaeela 95
l+ ++i pVq fIa++Rk+ DlWa+S+llS+l++ka+e++v+++Gp+++iyPslr++p++ ++++ e++ +e+ +a+lpnk+++i+ keae+++
biolip::3x1lA 4 LLRIKIVPVQPFIANSRKQLDLWASSHLLSMLMYKALEVIVDKFGPEHVIYPSLRDQPFFLKFYLgENIGDEILVANLPNKALAIVS-GKEAEKIE 98
6899******************************************************997765527999*****************.55699999 PP
Cmr2_N 96 eeiekalkeawke 108
eei+k++++ + +
biolip::3x1lA 99 EEIKKRIRDFLLQ 111
9999999987766 PP
== domain 2 score: 0.3 bits; conditional E-value: 0.04
Cmr2_N 24 agSwllSylawkaieelve 42
gS+ +S + w++i+++ +
biolip::3x1lA 464 SGSYYISLVGWELIRVFYN 482
599*********9999876 PP
Or compare biolip::3x1lA to CDD or PaperBLAST