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Align NP_001120792.1 to PF12478 (DUF3697)

NP_001120792.1 has 983 amino acids

Query:       DUF3697  [M=35]
Accession:   PF12478.8
Description: Ubiquitin-associated protein 2
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-19   56.4   0.2      3e-19   55.2   0.2    1.6  1  NP_001120792.1  


Domain annotation for each sequence (and alignments):
>> NP_001120792.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.2   0.2     3e-19     3e-19       3      35 .]     496     526 ..     495     526 .. 0.97

  Alignments for each domain:
  == domain 1  score: 55.2 bits;  conditional E-value: 3e-19
         DUF3697   3 SkIPasAVEMPgdslnsissLDVQFGaldFGse 35 
                     SkIPa AVEMPg++  +is+L++QFGal+FGse
  NP_001120792.1 496 SKIPALAVEMPGSA--DISGLNLQFGALQFGSE 526
                     9************9..****************8 PP



Or compare NP_001120792.1 to CDD or PaperBLAST