PaperBLAST – Find papers about a protein or its homologs

 

Align Q9D7J4 to PF12597 (Cox20)

Q9D7J4 has 117 amino acids

Query:       Cox20  [M=101]
Accession:   PF12597.12
Description: Cytochrome c oxidase assembly protein COX20
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.6e-16   44.5   0.0    6.6e-16   44.3   0.0    1.1  1  Q9D7J4    


Domain annotation for each sequence (and alignments):
>> Q9D7J4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.3   0.0   6.6e-16   6.6e-16      15      93 ..      19      97 ..       9     104 .. 0.91

  Alignments for each domain:
  == domain 1  score: 44.3 bits;  conditional E-value: 6.6e-16
   Cox20 15 dftklvkiPCaRdalltGigagfvvGslrfllgkniakaaNwavgtfvlgsivsyeqCqlkRrkekekmkravevveek 93
             ++++ ++PCaR+++l+G    +v+G  +fl+   i +++  +vg+f+l+ ++ +  C+++  k++ + + a+e +++k
  Q9D7J4 19 GILDVENTPCARESILYGSLGSIVTGLGHFLVTSRIRRSCDVGVGGFILVTLGCWFHCRYNFAKQRIQERIAREGIKNK 97
            567899*******************************************************999999999999888776 PP



Or compare Q9D7J4 to CDD or PaperBLAST